RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 DHCR24Q15392 516 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF691Q5VV52 312 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 TMEM225Q6GV28 225 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 SCD5Q86SK9 330 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 GTPBP8Q8N3Z3 284 aaPredicted RBP13.23□□□□□ -0.29
VTI1B-204ENST00000554659 OR7G3Q8NG95 312 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 STK35Q8TDR2 534 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 ZFP90Q8TF47 636 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 ARNT2Q9HBZ2 717 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 GLS2Q9UI32 602 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 MYH7BA7E2Y1 1941 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 A0A0A6YYH2 397 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 A6NJ64 397 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 A8MU76 341 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 CLEC3AO75596 197 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 OR8U9P0C7N5 309 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 CRHBPP24387 322 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 NDUFAF5Q5TEU4 345 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 CSNK1A1LQ8N752 337 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 OR13C3Q8NGS6 347 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 HHATLQ9HCP6 504 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 GJD2Q9UKL4 321 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 MYH11P35749 1972 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 PAHP00439 452 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 AKR1C4P17516 323 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 PRKACAP17612 351 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 PLCXD2Q0VAA5 305 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 SF3A2Q15428 464 aaKnown RBP13.23□□□□□ -0.29
VTI1B-204ENST00000554659 RNASE10Q5GAN6 216 aaKnown RBP13.23□□□□□ -0.29
VTI1B-204ENST00000554659 CNIH2Q6PI25 160 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 GPR149Q86SP6 731 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 TMEM40Q8WWA1 233 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 ZDHHC12Q96GR4 267 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 F8W036 122 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF140P52738 457 aaPredicted RBP13.23□□□□□ -0.29
VTI1B-204ENST00000554659 BLOC1S1P78537 153 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 EMX1Q04741 257 aaPredicted RBP13.23□□□□□ -0.29
VTI1B-204ENST00000554659 RNF111Q6ZNA4 994 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 CFAP77Q6ZQR2 320 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 NOXA1Q86UR1 476 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 NUBP2Q9Y5Y2 271 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 A0A1W2PP55 124 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 NAP1L6A6NFF2 107 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 CASC3O15234 703 aaKnown RBP13.22□□□□□ -0.29
VTI1B-204ENST00000554659 APBB3O95704 486 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 IFNA4P05014 189 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 DRD5P21918 477 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 ARRB1P49407 418 aaPredicted RBP13.22□□□□□ -0.29
VTI1B-204ENST00000554659 GRM2Q14416 872 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 ELOCQ15369 112 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 PGM2L1Q6PCE3 622 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 SHFQ7M4L6 423 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 B3GNT7Q8NFL0 401 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 HAVCR2Q8TDQ0 301 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 MAS1P04201 325 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 HEXBP07686 556 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 RAB4BP61018 213 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 RPS26P11Q5JNZ5 115 aaPredicted RBP13.22□□□□□ -0.29
VTI1B-204ENST00000554659 FIGNL1Q6PIW4 674 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 LRFN4Q6PJG9 635 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 OR2T35Q8NGX2 323 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 DAZLQ92904 295 aaKnown RBP13.22□□□□□ -0.29
VTI1B-204ENST00000554659 C3orf30Q96M34 536 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 PINK1Q9BXM7 581 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 OR51E2Q9H255 320 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 ADAMTS5Q9UNA0 930 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 MYH3P11055 1940 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 DNAJB6O75190 326 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 GRPRP30550 384 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 CD70P32970 193 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 ALDH3B1P43353 468 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF84P51523 738 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 IER5LQ5T953 404 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 LRRTM3Q86VH5 581 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 ARHGAP12Q8IWW6 846 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 OR4K13Q8NH42 304 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 MRI1Q9BV20 369 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 ALG8Q9BVK2 526 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 MAN2C1Q9NTJ4 1040 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 KLHL42Q9P2K6 505 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 PCDHA9Q9Y5H5 950 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 A0A0G2JMP0 313 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 DRGXA6NNA5 263 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF850A8MQ14 1090 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 PRAF2O60831 178 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 RNGTTO60942 597 aaKnown RBP13.22□□□□□ -0.29
VTI1B-204ENST00000554659 CDC123O75794 336 aaPredicted RBP13.22□□□□□ -0.29
VTI1B-204ENST00000554659 PRDX3P30048 256 aaKnown RBP13.22□□□□□ -0.29
VTI1B-204ENST00000554659 ALDH3B2P48448 385 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 RNF144AP50876 292 aaPredicted RBP13.22□□□□□ -0.29
VTI1B-204ENST00000554659 RAB40BQ12829 278 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 CCINQ13939 588 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 TBCEQ15813 527 aaPredicted RBP13.22□□□□□ -0.29
VTI1B-204ENST00000554659 PHF19Q5T6S3 580 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 GSG1LQ6UXU4 331 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 TMEM130Q8N3G9 435 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 ESX1Q8N693 406 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 OR4M2Q8NGB6 313 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 TRIB2Q92519 343 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms