RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 CASP3P42574 277 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 ZFP36L2P47974 494 aaKnown RBP12.95□□□□□ -0.34
PTCH1-226ENST00000553011 KCNJ2P63252 427 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 PLGLB1Q02325 96 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 FOXO1Q12778 655 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 CYP27C1Q4G0S4 372 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 EXOSC6Q5RKV6 272 aaKnown RBP12.95□□□□□ -0.34
PTCH1-226ENST00000553011 PAOXQ6QHF9 649 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 MIER2Q8N344 545 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 CDRT4Q8N9R6 151 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 GLB1L3Q8NCI6 653 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-226ENST00000553011 SLC16A11Q8NCK7 471 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 ST6GALNAC3Q8NDV1 305 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 VPS37AQ8NEZ2 397 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 OR56A1Q8NGH5 318 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 SFXN5Q8TD22 340 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 GPR151Q8TDV0 419 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 PIK3R3Q92569 461 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 JADE3Q92613 823 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 SLC35A4Q96G79 324 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 RILPQ96NA2 401 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 COL21A1Q96P44 957 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 OR52E6Q96RD3 313 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 SECISBP2Q96T21 854 aaKnown RBP12.95□□□□□ -0.34
PTCH1-226ENST00000553011 DOHHQ9BU89 302 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 TTTY12Q9BZ98 90 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 CCDC134Q9H6E4 229 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 Q9N2J8 555 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 GPATCH2Q9NW75 528 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 FAM120CQ9NX05 1096 aaKnown RBP12.95□□□□□ -0.34
PTCH1-226ENST00000553011 PCDHGB4Q9UN71 923 aa12.95□□□□□ -0.34
PTCH1-226ENST00000553011 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.95□□□□□ -0.34
PTCH1-226ENST00000553011 A0A0G2JND7 137 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 RNF103-CHMP3A0A140T963 221 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 LRRC3CA6NJW4 275 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 TTC36A6NLP5 189 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 TFECO14948 347 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-226ENST00000553011 HS6ST1O60243 411 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 GLSO94925 669 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-226ENST00000553011 VIMP08670 466 aaKnown RBP12.94□□□□□ -0.34
PTCH1-226ENST00000553011 KRT20P35900 424 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 RFX3P48380 749 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 PRIM2P49643 509 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 KCNK10P57789 538 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 PPIAP62937 165 aaKnown RBP12.94□□□□□ -0.34
PTCH1-226ENST00000553011 PSPHP78330 225 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 RPP38P78345 283 aaKnown RBP12.94□□□□□ -0.34
PTCH1-226ENST00000553011 SF3A3Q12874 501 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTCH1-226ENST00000553011 DUSP5Q16690 384 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 EIF2S3LQ2VIR3 472 aaKnown RBP12.94□□□□□ -0.34
PTCH1-226ENST00000553011 VPS26BQ4G0F5 336 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 CGB2Q6NT52 195 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 GFRALQ6UXV0 394 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 OR52N2Q8NGI0 321 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 CHMP6Q96FZ7 201 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 RMND5BQ96G75 393 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-226ENST00000553011 GPR137Q96N19 417 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 CCDC115Q96NT0 180 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 INPP5KQ9BT40 448 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 ANGPTL4Q9BY76 406 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 METTL7AQ9H8H3 244 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 IL1RL2Q9HB29 575 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 SEC14L3Q9UDX4 400 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 BTNL2Q9UIR0 455 aa12.94□□□□□ -0.34
PTCH1-226ENST00000553011 RELNP78509 3460 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 ANKRD33BA6NCL7 494 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 PRAMEF25A6NGN4 478 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 ABCB7O75027 752 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 TRIM3O75382 744 aaPredicted RBP12.93□□□□□ -0.34
PTCH1-226ENST00000553011 UNC5CO95185 931 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 IGKV1D-16P01601 117 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 ALOX5P09917 674 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 CYP4B1P13584 511 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 PTGDSP41222 190 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 CDKN2CP42773 168 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 MRPL19P49406 292 aaKnown RBP12.93□□□□□ -0.34
PTCH1-226ENST00000553011 POLR2JP52435 117 aaKnown RBP12.93□□□□□ -0.34
PTCH1-226ENST00000553011 PNLIPRP2P54317 469 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 STX1BP61266 288 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 RPS26P62854 115 aaKnown RBP12.93□□□□□ -0.34
PTCH1-226ENST00000553011 MRPS22P82650 360 aaKnown RBP12.93□□□□□ -0.34
PTCH1-226ENST00000553011 HSF1Q00613 529 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 EFR3AQ14156 821 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 ELOAQ14241 798 aaKnown RBP12.93□□□□□ -0.34
PTCH1-226ENST00000553011 DECR1Q16698 335 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 TIGD2Q4W5G0 525 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 TBCELQ5QJ74 424 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 CDC73Q6P1J9 531 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 ZCCHC12Q6PEW1 402 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 C6orf120Q7Z4R8 191 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 GALNT10Q86SR1 603 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 TMEM251Q8N6I4 163 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 STON2Q8WXE9 905 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 MOAP1Q96BY2 351 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 NTNG2Q96CW9 530 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 JSRP1Q96MG2 331 aaPredicted RBP12.93□□□□□ -0.34
PTCH1-226ENST00000553011 OSBPL11Q9BXB4 747 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 ACTRT3Q9BYD9 372 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 DEFB127Q9H1M4 99 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 SERHL2Q9H4I8 314 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms