RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 CA13Q8N1Q1 262 aa13.73□□□□□ -0.21
SPOCK3-226ENST00000541354 STX19Q8N4C7 294 aa13.73□□□□□ -0.21
SPOCK3-226ENST00000541354 B3GNT7Q8NFL0 401 aa13.73□□□□□ -0.21
SPOCK3-226ENST00000541354 SNRNP27Q8WVK2 155 aaKnown RBP13.73□□□□□ -0.21
SPOCK3-226ENST00000541354 ACTRT3Q9BYD9 372 aa13.73□□□□□ -0.21
SPOCK3-226ENST00000541354 OR51I1Q9H343 314 aa13.73□□□□□ -0.21
SPOCK3-226ENST00000541354 MKLN1Q9UL63 735 aa13.73□□□□□ -0.21
SPOCK3-226ENST00000541354 LOC105369274A0A096LPK9 316 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 LOC102723532A0A0G2JNH3 316 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 CYR61O00622 381 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 TOX3O15405 576 aaPredicted RBP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 SEMA7AO75326 666 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 BCKDHBP21953 392 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 FUT4P22083 530 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 GADD45AP24522 165 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 ELAVL4P26378 380 aaKnown RBP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 ALDH4A1P30038 563 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 MAN2A2P49641 1150 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 CLK1P49759 484 aaKnown RBP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 PSMD7P51665 324 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 TCEA2Q15560 299 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 CLPPQ16740 277 aaPredicted RBP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 SYT16Q17RD7 645 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 SLC25A30Q5SVS4 291 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 MEDAGQ5VYS4 303 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 C12orf73Q69YU5 71 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 OR4N4Q8N0Y3 316 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 LINC00471Q8N535 108 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 KBTBD8Q8NFY9 601 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 MCFD2Q8NI22 146 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 ZNF578Q96N58 590 aaPredicted RBP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 PELOQ9BRX2 385 aaKnown RBP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 UCK2Q9BZX2 261 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 POLE3Q9NRF9 147 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 CLN6Q9NWW5 311 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 TNRC18O15417 2968 aaPredicted RBP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 REV3LO60673 3130 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 A0A0G2JN53 185 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 PLOD3O60568 738 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 NSA2O95478 260 aaKnown RBP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 GPR75O95800 540 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 PTHP01270 115 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 BCHEP06276 602 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 CPMP14384 443 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 ST6GAL1P15907 406 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 SIGLEC14Q08ET2 396 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 PLAG1Q6DJT9 500 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 HEPHL1Q6MZM0 1159 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 CDC73Q6P1J9 531 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 RNF217Q8TC41 542 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 HOXB13Q92826 284 aaPredicted RBP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 MVB12AQ96EY5 273 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 SERHL2Q9H4I8 314 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 TMCC3Q9ULS5 477 aa13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 MN1Q10571 1320 aaPredicted RBP13.72□□□□□ -0.21
SPOCK3-226ENST00000541354 TRBV4-1A0A0J9YWV2 114 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 H0YIG0 161 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 STK25O00506 426 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 CNOT3O75175 753 aaKnown RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 ERAL1O75616 437 aaKnown RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 ETV6P41212 452 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 IGLV3-21P80748 117 aaPredicted RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 CYP27C1Q4G0S4 372 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 DEFB134Q4QY38 66 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 ARMCX4Q5H9R4 360 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 LYSMD4Q5XG99 296 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 PRSS42Q7Z5A4 293 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 AMER2Q8N7J2 671 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 NUP43Q8NFH3 380 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 Q96MT0 163 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 DPYSL5Q9BPU6 564 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 DUSP23Q9BVJ7 150 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 TAPBPLQ9BX59 468 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 POLR2J2Q9GZM3 115 aaKnown RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 POLR2J3Q9H1A7 115 aaKnown RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 MIR1-1HGQ9H1L0 117 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 DAPK2Q9UIK4 370 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 C19orf53Q9UNZ5 99 aaPredicted RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 SATB2Q9UPW6 733 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 MRPS33Q9Y291 106 aaKnown RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 IFT52Q9Y366 437 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 SAGE2PA6NJ88 616 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 RHPN2P1A8MT19 583 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 DSCR3O14972 297 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 SH3BP5O60239 455 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 GLB1P16278 677 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 CNR2P34972 360 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 ARRB1P49407 418 aaPredicted RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 XKP51811 444 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 RPS3AP61247 264 aaKnown RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 RHAGQ02094 409 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 CDC20Q12834 499 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 GANABQ14697 944 aaKnown RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 ATAD3BQ5T9A4 648 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 PMS2CLQ68D20 193 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 TNFAIP8L2Q6P589 184 aaPredicted RBP13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 ZNF595Q8IYB9 648 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 TAGAPQ8N103 731 aa13.71□□□□□ -0.21
SPOCK3-226ENST00000541354 GTPBP3Q969Y2 492 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms