RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 CPN1P15169 458 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 ITGALP20701 1170 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 RPA3P35244 121 aaPredicted RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 NSFP46459 744 aaKnown RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 GPR143P51810 404 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 NAGLUP54802 743 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 OLR1P78380 273 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 BTG2P78543 158 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 CHRNB3Q05901 458 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 LRRC63Q05C16 580 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 TBL3Q12788 808 aaKnown RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 FGFBP1Q14512 234 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 PTPRCAPQ14761 206 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 DNAJC21Q5F1R6 531 aaKnown RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 NHSL2Q5HYW2 709 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 TOR1AIP1Q5JTV8 583 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 CASC10Q5T4H9 136 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 KPRPQ5T749 579 aaPredicted RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 ASPHD2Q6ICH7 369 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 PPP4R4Q6NUP7 873 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 GBP6Q6ZN66 633 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 CENPQQ7L2Z9 268 aaPredicted RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 TAS2R42Q7RTR8 314 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 PCGF5Q86SE9 256 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 CCDC25Q86WR0 208 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 PLD3Q8IV08 490 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 DCUN1D3Q8IWE4 304 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 CMIPQ8IY22 773 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 CLDN19Q8N6F1 224 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 OR5T3Q8NGG3 340 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 OR5L2Q8NGL0 311 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 GSDMBQ8TAX9 411 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 SKA2Q8WVK7 121 aaPredicted RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 ATL1Q8WXF7 558 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 TMEM186Q96B77 213 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 TMIGD2Q96BF3 282 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 ZNF597Q96LX8 424 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 OR2A5Q96R48 311 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 TRIB3Q96RU7 358 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 TBX15Q96SF7 602 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 RSPO3Q9BXY4 272 aaPredicted RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 TRIM2Q9C040 744 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 ZMAT3Q9HA38 289 aaKnown RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 ZNHIT6Q9NWK9 470 aaKnown RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 NAALAD2Q9Y3Q0 740 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 SPEF1Q9Y4P9 236 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 MORC2Q9Y6X9 1032 aaPredicted RBP3.45□□□□□ -1.86
YBX3-205ENST00000536107 RAI1Q7Z5J4 1906 aaPredicted RBP3.44□□□□□ -1.86
YBX3-205ENST00000536107 MED12Q93074 2177 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 GOLGA6L10A0A0M3HER8 536 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 A0A1B0GUS0 222 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 GOLGA6L10A6NI86 522 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 E7ENX8 843 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 GOLGA6L19H0YKK7 550 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 KCNK1O00180 336 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 PLOD2O00469 737 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 ABCD4O14678 606 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 DHHO43323 396 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 EMC8O43402 210 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 CHST10O43529 356 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 GPC4O75487 556 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 RNF8O76064 485 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 FTH1P02794 183 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 ALDOAP04075 364 aaKnown RBP3.44□□□□□ -1.86
YBX3-205ENST00000536107 IFNA16P05015 189 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 CRYBA1P05813 215 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 CALB1P05937 261 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 CSF1P09603 554 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 NDUFB7P17568 137 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 DDX5P17844 614 aaKnown RBP3.44□□□□□ -1.86
YBX3-205ENST00000536107 ADRA2CP18825 462 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 TNNI3P19429 210 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 IL32P24001 234 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 CCNCP24863 283 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 FOXN2P32314 431 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 PNLIPRP1P54315 467 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 RPL7AP62424 266 aaKnown RBP3.44□□□□□ -1.86
YBX3-205ENST00000536107 SKP1P63208 163 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 PPIDQ08752 370 aaKnown RBP3.44□□□□□ -1.86
YBX3-205ENST00000536107 HSPA14Q0VDF9 509 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 ASPHQ12797 758 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 EXOC3L4Q17RC7 722 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.44□□□□□ -1.86
YBX3-205ENST00000536107 C2orf68Q2NKX9 166 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 CTU2Q2VPK5 515 aaKnown RBP3.44□□□□□ -1.86
YBX3-205ENST00000536107 AARS2Q5JTZ9 985 aaKnown RBP3.44□□□□□ -1.86
YBX3-205ENST00000536107 FAM182AQ5T1J6 154 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 RESP18Q5W5W9 173 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 SLC22A25Q6T423 547 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 SBSNQ6UWP8 590 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 STAC2Q6ZMT1 411 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 R3HCC1LQ7Z5L2 792 aaKnown RBP3.44□□□□□ -1.86
YBX3-205ENST00000536107 LDB1Q86U70 411 aaPredicted RBP3.44□□□□□ -1.86
YBX3-205ENST00000536107 PIANPQ8IYJ0 282 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 FAM71AQ8IYT1 594 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 SYT14Q8NB59 555 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 STEAP2Q8NFT2 490 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 OR10G3Q8NGC4 313 aa3.44□□□□□ -1.86
YBX3-205ENST00000536107 OR2A1Q8NGT9 310 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms