RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SLC25A25Q6KCM7 469 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 GPAT4Q86UL3 456 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 DIO2Q92813 273 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 PDLIM5Q96HC4 596 aaKnown RBP15.33■□□□□ 0.05
USP42-207ENST00000521713 ASB16Q96NS5 453 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 ACTRT3Q9BYD9 372 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 MKRN2Q9H000 416 aaKnown RBP15.33■□□□□ 0.05
USP42-207ENST00000521713 LHPPQ9H008 270 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 DNAJC27Q9NZQ0 273 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 LRIT1Q9P2V4 623 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 NENFQ9UMX5 172 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 PTGDR2Q9Y5Y4 395 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 A0A0U1RQS6 177 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 BRINP1O60477 761 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 RPS17P08708 135 aaKnown RBP15.33■□□□□ 0.04
USP42-207ENST00000521713 C1SP09871 688 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 OR1E2P47887 323 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 ZNF84P51523 738 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 MC1RQ01726 317 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 C18orf21Q32NC0 220 aaPredicted RBP15.33■□□□□ 0.04
USP42-207ENST00000521713 CES4AQ5XG92 561 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 MCATQ8IVS2 390 aaKnown RBP15.33■□□□□ 0.04
USP42-207ENST00000521713 FANK1Q8TC84 345 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 ECHDC3Q96DC8 303 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 POTEKPQ9BYX7 375 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 ZNF700Q9H0M5 742 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 USP54Q70EL1 1684 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 VSTM2BA6NLU5 285 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 B8ZZF3 427 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 OR12D2P58182 307 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 FAM69BQ5VUD6 431 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 CDRT4Q8N9R6 151 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 LILRB4Q8NHJ6 448 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 ARL6Q9H0F7 186 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 MTHFD2LQ9H903 347 aaPredicted RBP15.33■□□□□ 0.04
USP42-207ENST00000521713 RHCGQ9UBD6 479 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 IGLV3-10A0A075B6K4 115 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 PROM1O43490 865 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 BCAS1O75363 584 aaPredicted RBP15.33■□□□□ 0.04
USP42-207ENST00000521713 DHRS4L1P0CG22 281 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 ACTC1P68032 377 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 ACTA1P68133 377 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 MRPL49Q13405 166 aaKnown RBP15.33■□□□□ 0.04
USP42-207ENST00000521713 GXYLT1Q4G148 440 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 TMEM181Q9P2C4 612 aa15.33■□□□□ 0.04
USP42-207ENST00000521713 PCDH17O14917 1159 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 SOX14O95416 240 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 ADRA1AP35348 466 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 BMXP51813 675 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 CLRN1P58418 232 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 NTRK2Q16620 822 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 RAET1LQ5VY80 246 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 ALG1LQ6GMV1 187 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 ARRDC3Q96B67 414 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 NTMT1Q9BV86 223 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 UBE2ZQ9H832 354 aaPredicted RBP15.32■□□□□ 0.04
USP42-207ENST00000521713 DMRT3Q9NQL9 472 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 TAAR2Q9P1P5 351 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 PHIPQ8WWQ0 1821 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 A0A1B0GTW7 788 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 AGAP5A6NIR3 686 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 FAM155AB1AL88 458 aaPredicted RBP15.32■□□□□ 0.04
USP42-207ENST00000521713 J3QLW9 94 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 ZNF19P17023 458 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 SPRED3Q2MJR0 410 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 SLC27A4Q6P1M0 643 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 LETMD1Q6P1Q0 360 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 NKD1Q969G9 470 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 NEIL2Q969S2 332 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 APIPQ96GX9 242 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 ALOXE3Q9BYJ1 711 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 B3GNT4Q9C0J1 378 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 SAV1Q9H4B6 383 aaPredicted RBP15.32■□□□□ 0.04
USP42-207ENST00000521713 PCDHB16Q9NRJ7 776 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 MGAT4CQ9UBM8 478 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 C14orf166Q9Y224 244 aaKnown RBP15.32■□□□□ 0.04
USP42-207ENST00000521713 F5H0A9 414 aaPredicted RBP15.32■□□□□ 0.04
USP42-207ENST00000521713 RBBP9O75884 186 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 RPP14O95059 124 aaKnown RBP15.32■□□□□ 0.04
USP42-207ENST00000521713 IL32P24001 234 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 TMED4Q7Z7H5 227 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 ASB11Q8WXH4 323 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 TCEAL7Q9BRU2 100 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 TP63Q9H3D4 680 aaPredicted RBP15.32■□□□□ 0.04
USP42-207ENST00000521713 KCNIP3Q9Y2W7 256 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 AQP9O43315 295 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 LAMP1P11279 417 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 RHCEP18577 417 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 SNTB2Q13425 540 aaKnown RBP15.32■□□□□ 0.04
USP42-207ENST00000521713 TUBB3Q13509 450 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 GK3PQ14409 553 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 GINS1Q14691 196 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 KCTD18Q6PI47 426 aaPredicted RBP15.32■□□□□ 0.04
USP42-207ENST00000521713 ZNF551Q7Z340 670 aaPredicted RBP15.32■□□□□ 0.04
USP42-207ENST00000521713 NRG4Q8WWG1 115 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 CHFRQ96EP1 664 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 PTTG3PQ9NZH4 202 aa15.32■□□□□ 0.04
USP42-207ENST00000521713 GRXCR2A6NFK2 248 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 HMX3A6NHT5 357 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 SLC9B1P1A6NJY1 282 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms