RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 USP53Q70EK8 1073 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 ABI3BPQ7Z7G0 1075 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 PEX5LQ8IYB4 626 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 AMER2Q8N7J2 671 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 AVL9Q8NBF6 648 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 OR4K5Q8NGD3 323 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 B4GALNT2Q8NHY0 566 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 SLC7A13Q8TCU3 470 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 GNPDA2Q8TDQ7 276 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 SMIM10Q96HG1 83 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 RHNO1Q9BSD3 238 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 TBCCD1Q9NVR7 557 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 USP36Q9P275 1121 aaKnown RBP13.17□□□□□ -0.3
SPIDR-214ENST00000521550 REV1Q9UBZ9 1251 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 DAPP1Q9UN19 280 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 ERGIC3Q9Y282 383 aa13.17□□□□□ -0.3
SPIDR-214ENST00000521550 TNRC6BQ9UPQ9 1833 aaKnown RBP13.16□□□□□ -0.3
SPIDR-214ENST00000521550 WASHC1A8K0Z3 465 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 CBFA2T3O75081 653 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 DHPSP49366 369 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-214ENST00000521550 SMSP52788 366 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 LSM3P62310 102 aaKnown RBP13.16□□□□□ -0.3
SPIDR-214ENST00000521550 SKP1P63208 163 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 NCF4Q15080 339 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 SEC23BQ15437 767 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TCEA2Q15560 299 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 OCLNQ16625 522 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 ZNF750Q32MQ0 723 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 DEFB134Q4QY38 66 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TMEM201Q5SNT2 666 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TMEM236Q5W0B7 351 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 C12orf73Q69YU5 71 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 C1orf94Q6P1W5 598 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TRIM73Q86UV7 250 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
SPIDR-214ENST00000521550 FRMD1Q8N878 549 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 OR6T1Q8NGN1 323 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 FLVCR1-AS1Q8TAF5 88 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 ZCCHC10Q8TBK6 192 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TANKQ92844 425 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 C16orf58Q96GQ5 468 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 SH3YL1Q96HL8 342 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-214ENST00000521550 CCDC3Q9BQI4 270 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TWSG1Q9GZX9 223 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 ARMC7Q9H6L4 198 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 RXFP3Q9NSD7 469 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 NCOR2Q9Y618 2525 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 CCDC88CQ9P219 2028 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 IGLV3-19P01714 112 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 IFI6P09912 130 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 ADORA3P0DMS8 318 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 MAN2A2P49641 1150 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 LIMK1P53667 647 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 C1DQ13901 141 aaKnown RBP13.16□□□□□ -0.3
SPIDR-214ENST00000521550 IRF3Q14653 427 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 INAVAQ3KP66 663 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 ARMCX4Q5H9R4 360 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TPRG1LQ5T0D9 272 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 FCRL6Q6DN72 434 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TCEAL6Q6IPX3 200 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 MFSD12Q6NUT3 480 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 ZCCHC12Q6PEW1 402 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 SLC46A3Q7Z3Q1 461 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TAF8Q7Z7C8 310 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 CYP4Z2PQ8N1L4 340 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 SLC15A4Q8N697 577 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 OR4D11Q8NGI4 311 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 OR9Q1Q8NGQ5 310 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 NDNFQ8TB73 568 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 BAHD1Q8TBE0 780 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TEX47Q8TBZ9 253 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 DYNC2LI1Q8TCX1 351 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 KAT2AQ92830 837 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TCEAL3Q969E4 200 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 TMEM80Q96HE8 168 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 SLC38A2Q96QD8 506 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 ARHGDIGQ99819 225 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 FUZQ9BT04 418 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 EVA1AQ9H8M9 152 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 HRASLS2Q9NWW9 162 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 KCMF1Q9P0J7 381 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 PILRAQ9UKJ1 303 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 SLC22A7Q9Y694 548 aa13.16□□□□□ -0.3
SPIDR-214ENST00000521550 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 ZNF217O75362 1048 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 CYP7B1O75881 506 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 AK1P00568 194 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 CPMP14384 443 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 TNNI3P19429 210 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 CSTF2P33240 577 aaKnown RBP eCLIP13.15□□□□□ -0.31e-11■■■■□ 21.8
SPIDR-214ENST00000521550 TGFBR2P37173 567 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 RGS8P57771 180 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-214ENST00000521550 RHAGQ02094 409 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 SYT16Q17RD7 645 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 RGS21Q2M5E4 152 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 TMEM44Q2T9K0 475 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 ENTPD8Q5MY95 495 aa13.15□□□□□ -0.3
SPIDR-214ENST00000521550 SLC25A30Q5SVS4 291 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms