RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EQTNQ9NQ60 294 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 EXD2Q9NVH0 621 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 CD300AQ9UGN4 299 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 TEKT2Q9UIF3 430 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 MRTO4Q9UKD2 239 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 YARS2Q9Y2Z4 477 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 L3MBTL1Q9Y468 752 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 SETXQ7Z333 2677 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 A8MVJ9 347 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 FAM220BPB1ANY3 271 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 NME4O00746 187 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 DNAJB5O75953 348 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 IL33O95760 270 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 TFPTP0C1Z6 253 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 ARAFP10398 606 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 ETFAP13804 333 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 ITPKBP27987 946 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 GABRA3P34903 492 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 PNLIPRP2P54317 469 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 PSMD4P55036 377 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 NRG3P56975 720 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 NCALDP61601 193 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 RPS26P62854 115 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 POU6F2P78424 691 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 VEZF1Q14119 521 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 MEP1AQ16819 746 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 ZNF630Q2M218 657 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 DEFB109BQ30KR1 87 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 SAMD4BQ5PRF9 694 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 ACER2Q5QJU3 275 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 ATAD3BQ5T9A4 648 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 IRAK1BP1Q5VVH5 260 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 TNFAIP8L2Q6P589 184 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 OPN5Q6U736 354 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 IGFL2Q6UWQ7 119 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 LYPD8Q6UX82 237 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 ANGPTL8Q6UXH0 198 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 ASRGL1Q7L266 308 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 PTOV1Q86YD1 416 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC44A2Q8IWA5 706 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 GPALPP1Q8IXQ4 340 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 DEFB107AQ8IZN7 70 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC34A3Q8N130 599 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 C10orf111Q8N326 155 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 COX18Q8N8Q8 333 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC22A8Q8TCC7 542 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 PNPT1Q8TCS8 783 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 BRIX1Q8TDN6 353 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 GPR151Q8TDV0 419 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 APOBEC4Q8WW27 367 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC39A7Q92504 469 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC9A6Q92581 669 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 GAL3ST4Q96RP7 486 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 LMF1Q96S06 567 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 ECSITQ9BQ95 431 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 G6PC3Q9BUM1 346 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 SAP130Q9H0E3 1048 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 MMADHCQ9H3L0 296 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 BCL2L10Q9HD36 194 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 CALML5Q9NZT1 146 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 P2RX2Q9UBL9 471 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 CBLCQ9ULV8 474 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 PCDHGA9Q9Y5G4 932 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 TNRC6AQ8NDV7 1962 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 DSPPQ9NZW4 1301 aa11.06□□□□□ -0.64
PDLIM5-220ENST00000514830 OR6C70A6NIJ9 312 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 GYG2O15488 501 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 TSPAN2O60636 221 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 ITGA10O75578 1167 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 OR2J2O76002 312 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 KCNK2O95069 426 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 NGFRP08138 427 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 FBXO45P0C2W1 286 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 OR12D1P0DN82 309 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 ITGA3P26006 1051 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 ABCD3P28288 659 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 HTR1EP28566 365 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 TMED10P49755 219 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 NR0B1P51843 470 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 MRPS22P82650 360 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 FUT5Q11128 374 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 MAPK11Q15759 364 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 ZSCAN26Q16670 478 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 DECR1Q16698 335 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 GCNT6Q5T4J0 391 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 AGAP7PQ5VUJ5 663 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 TMEM81Q6P7N7 255 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 BORAQ6PGQ7 559 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 LRRC74BQ6ZQY2 392 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 ZZZ3Q8IYH5 903 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 AMER2Q8N7J2 671 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 C11orf65Q8NCR3 313 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 TNIP2Q8NFZ5 429 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 OR5D16Q8NGK9 328 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 OR10A6Q8NH74 314 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC38A5Q8WUX1 472 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 RNF138Q8WVD3 245 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 XAGE5Q8WWM1 108 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms