RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 STARD5Q9NSY2 213 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 ELOVL2Q9NXB9 296 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 ONECUT1Q9UBC0 465 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 PSG11Q9UQ72 335 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 KIR2DL5BA0A0G2JN68 375 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 KIR2DL5BA0A0G2JPC4 375 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 C13orf42A0A1B0GVH6 325 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 H2AFZP0C0S5 128 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 RPS2P15880 293 aaKnown RBP1.21□□□□□ -2.22
PDGFC-208ENST00000512711 VCLP18206 1134 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 SDC1P18827 310 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 HTR1FP30939 366 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 SGSHP51688 502 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 RPL32P62910 135 aaKnown RBP1.21□□□□□ -2.22
PDGFC-208ENST00000512711 PTGES3Q15185 160 aaKnown RBP1.21□□□□□ -2.22
PDGFC-208ENST00000512711 STXBP2Q15833 593 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 KCTD19Q17RG1 926 aaPredicted RBP1.21□□□□□ -2.22
PDGFC-208ENST00000512711 SHROOM1Q2M3G4 852 aaPredicted RBP1.21□□□□□ -2.22
PDGFC-208ENST00000512711 KBTBD12Q3ZCT8 623 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 GPAT3Q53EU6 434 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 ZFP2Q6ZN57 461 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 Q7L0L9 218 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 TSEN54Q7Z6J9 526 aaKnown RBP1.21□□□□□ -2.22
PDGFC-208ENST00000512711 SLC22A16Q86VW1 577 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 VSIG1Q86XK7 387 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 CLYBLQ8N0X4 340 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 KIR2DL5AQ8N109 375 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 NAT8LQ8N9F0 302 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 OR4A16Q8NH70 328 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 TEKT1Q969V4 418 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 ERP27Q96DN0 273 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 SLC35E1Q96K37 410 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 NRTNQ99748 197 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 RSPO3Q9BXY4 272 aaPredicted RBP1.21□□□□□ -2.22
PDGFC-208ENST00000512711 ABCG8Q9H221 673 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 CNIH4Q9P003 139 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 ERVK-18Q9QC07 812 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 DUSP12Q9UNI6 340 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 L3MBTL1Q9Y468 752 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 PPIAL4AQ9Y536 164 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 NPC1L1Q9UHC9 1359 aa1.21□□□□□ -2.22
PDGFC-208ENST00000512711 SLIT3O75094 1523 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 TRBV6-6A0A0A6YYG2 114 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 TRBV7-9A0A0J9YWB2 115 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 A0A0J9YXY3 114 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 SMIM30A4D0T7 59 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 LRRD1A4D1F6 860 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 TUBAL3A6NHL2 446 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 FAM166BA8MTA8 275 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 TBCAO75347 108 aaKnown RBP1.2□□□□□ -2.22
PDGFC-208ENST00000512711 LYPLA1O75608 230 aaPredicted RBP1.2□□□□□ -2.22
PDGFC-208ENST00000512711 SCRG1O75711 98 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 OR8U8P0C7N1 319 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 CDH5P33151 784 aaPredicted RBP1.2□□□□□ -2.22
PDGFC-208ENST00000512711 NF2P35240 595 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 NUDT1P36639 197 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 NPY2RP49146 381 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 LHX2P50458 406 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 LIM2P55344 173 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 NUP107P57740 925 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 PFN3P60673 137 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 RPS6P62753 249 aaKnown RBP1.2□□□□□ -2.22
PDGFC-208ENST00000512711 KCNJ11Q14654 390 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 ZNF699Q32M78 642 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 MEDAGQ5VYS4 303 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 PEX5LQ8IYB4 626 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 CHCHD4Q8N4Q1 142 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 C20orf203Q8NBC4 194 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 NEIL3Q8TAT5 605 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 C7orf33Q8WU49 177 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 NEIL2Q969S2 332 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 DEFB118Q96PH6 123 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 CNPY3Q9BT09 278 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 CACNG6Q9BXT2 260 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 OSBPL8Q9BZF1 889 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 PLA2G2FQ9BZM2 168 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 VCXQ9H320 206 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 RNPEPL1Q9HAU8 725 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 FAM114A2Q9NRY5 505 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 PNPLA3Q9NST1 481 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 ACOXLQ9NUZ1 547 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 NECAP2Q9NVZ3 263 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 MARCH5Q9NX47 278 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 MBD2Q9UBB5 411 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 TRPC4Q9UBN4 977 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 TRMT6Q9UJA5 497 aaKnown RBP1.2□□□□□ -2.22
PDGFC-208ENST00000512711 PURGQ9UJV8 347 aaKnown RBP1.2□□□□□ -2.22
PDGFC-208ENST00000512711 COL1A2P08123 1366 aa1.2□□□□□ -2.22
PDGFC-208ENST00000512711 C5orf51A6NDU8 294 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 E9PLD3 99 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 H3BMH7 237 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 K7ENP7 123 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 DLGAP1O14490 977 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 RCC1P18754 421 aaPredicted RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 STARP49675 285 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 STK19P49842 368 aaPredicted RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 NLRP11P59045 1033 aaKnown RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 ASIC1P78348 528 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 RBP5P82980 135 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 OTUD4Q01804 1114 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms