RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 AMBRA1Q9C0C7 1298 aa11.86□□□□□ -0.51
POLR2J3-216ENST00000511773 STMN4Q9H169 189 aaPredicted RBP11.86□□□□□ -0.51
POLR2J3-216ENST00000511773 ANKRA2Q9H9E1 313 aa11.86□□□□□ -0.51
POLR2J3-216ENST00000511773 PRODH2Q9UF12 536 aa11.86□□□□□ -0.51
POLR2J3-216ENST00000511773 ZNF639Q9UID6 485 aa11.86□□□□□ -0.51
POLR2J3-216ENST00000511773 CDC42EP3Q9UKI2 254 aa11.86□□□□□ -0.51
POLR2J3-216ENST00000511773 RNF11Q9Y3C5 154 aa11.86□□□□□ -0.51
POLR2J3-216ENST00000511773 JRKLQ9Y4A0 524 aa11.86□□□□□ -0.51
POLR2J3-216ENST00000511773 RNF115Q9Y4L5 304 aa11.86□□□□□ -0.51
POLR2J3-216ENST00000511773 TO15178 435 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 NDUFS7O75251 213 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 SEMA3DO95025 777 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 ALDOAP04075 364 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 FCGR2AP12318 317 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 CSNK2A2P19784 350 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 SLC6A8P48029 635 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 MAPK12P53778 367 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 GAS1P54826 345 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 CTBP2P56545 445 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 ZNF844Q08AG5 666 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 EFR3AQ14156 821 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 ZKSCAN8Q15776 578 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 CTU2Q2VPK5 515 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 SLC48A1Q6P1K1 146 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 GOLGA7Q7Z5G4 137 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 CMC1Q7Z7K0 106 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 ZBED8Q8IZ13 594 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 LILRB1Q8NHL6 650 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 WDR20Q8TBZ3 569 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 ACTRT1Q8TDG2 376 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 SMAP2Q8WU79 429 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 HS6ST2Q96MM7 605 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 OSBPL9Q96SU4 736 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 SERPINI1Q99574 410 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 RBBP8Q99708 897 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 TACO1Q9BSH4 297 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 BEX2Q9BXY8 128 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 PRRG4Q9BZD6 226 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 FOLH1BQ9HBA9 442 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 MED11Q9P086 117 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 GDF2Q9UK05 429 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 GPR55Q9Y2T6 319 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 PCDHA9Q9Y5H5 950 aa11.85□□□□□ -0.51
POLR2J3-216ENST00000511773 A0A1W2PP18 115 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 OR2M5A3KFT3 312 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 FOXE1O00358 373 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 GMFGO60234 142 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 TSPAN2O60636 221 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 CD3EP07766 207 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 DANCRP0C864 163 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 GFAPP14136 432 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 EVI2BP34910 448 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 EIF1AXP47813 144 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 ALDH9A1P49189 494 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 RPS3AP61247 264 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 PFKFB4Q16877 469 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 NPSR1Q6W5P4 371 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 MILR1Q7Z6M3 343 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 TBC1D1Q86TI0 1168 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 KLHL7Q8IXQ5 586 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 ZNF619Q8N2I2 560 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 OR2M3Q8NG83 312 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 OR6K3Q8NGY3 331 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 GFM2Q969S9 779 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 BTBD9Q96Q07 612 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 CDK15Q96Q40 435 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 LRRC1Q9BTT6 524 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 TRIM31Q9BZY9 425 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 IPPKQ9H8X2 491 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 NMRAL1Q9HBL8 299 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 PFDN4Q9NQP4 134 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 PLSCR4Q9NRQ2 329 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 CES1P1Q9UKY3 287 aa11.84□□□□□ -0.51
POLR2J3-216ENST00000511773 PCNX3Q9H6A9 2034 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 IGHV4-30-2A0A087WSY4 118 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 C1orf226A1L170 272 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 SHISA8B8ZZ34 492 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 SSX4O60224 188 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 UGDHO60701 494 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 LTA4HP09960 611 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 CT45A8P0DMV1 189 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 CT45A9P0DMV2 189 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 MTHFD2P13995 350 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 SSTR1P30872 391 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 ILF2Q12905 390 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 GTF2H2Q13888 395 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 CT45A2Q5DJT8 189 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 SGO1Q5FBB7 561 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 LGSNQ5TDP6 509 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 GTF2H2CQ6P1K8 395 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 DNM1P46Q6ZS02 220 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 PAGE2Q7Z2X7 111 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 COMMD6Q7Z4G1 85 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 ATG4DQ86TL0 474 aaPredicted RBP11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 METTL25Q8N6Q8 603 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 FADS6Q8N9I5 356 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 KBTBD8Q8NFY9 601 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 OR4N2Q8NGD1 307 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 CDKL2Q92772 493 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms