RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 OR52N2Q8NGI0 321 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 OR9I1Q8NGQ6 314 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF75CPQ92670 426 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 METTL2AQ96IZ6 378 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 PPP3R2Q96LZ3 170 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 EBF4Q9BQW3 602 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC6A13Q9NSD5 602 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 AIG1Q9NVV5 245 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 SPRR3Q9UBC9 169 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 COPS7AQ9UBW8 275 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 ERRFI1Q9UJM3 462 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 G3BP2Q9UN86 482 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 GPR55Q9Y2T6 319 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 PCDHB14Q9Y5E9 798 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 COPG1Q9Y678 874 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 CSMD1Q96PZ7 3565 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF407Q9C0G0 2248 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 NCOA6Q14686 2063 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 RP1L1Q8IWN7 2480 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 hCG_2014768A0A024R1R8 64 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 A0A087WV62 115 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 PRAMEF27A3QJZ7 478 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 SYNDIG1LA6NDD5 238 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 FRG2CA6NGY1 282 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 FAM166BA8MTA8 275 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 A8MVJ9 347 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 PLOD2O00469 737 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 FCHO1O14526 889 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 TO15178 435 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 HS6ST1O60243 411 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 TRIM3O75382 744 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 RASAL1O95294 804 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 C6orf47O95873 294 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 KITP10721 976 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 COX7A2P14406 83 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 HOXB9P17482 250 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 CDKN2CP42773 168 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 RPL14P50914 215 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 GAS1P54826 345 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 NME5P56597 212 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 AP2B1P63010 937 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 EMX2Q04743 252 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 FUT5Q11128 374 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF155Q12901 538 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 HEPACAMQ14CZ8 416 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 EIF2S3LQ2VIR3 472 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 GTDC1Q4AE62 458 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 ATP6AP1LQ52LC2 224 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 SPANXN4Q5MJ08 99 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 DCST1Q5T197 706 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 HIST2H2BCQ6DN03 193 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 OR4F3Q6IEY1 312 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 OGFOD2Q6N063 350 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 FAM180AQ6UWF9 173 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 APOOLQ6UXV4 268 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 RTL4Q6ZR62 310 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 HDXQ7Z353 690 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 GALNT10Q86SR1 603 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 CROCCP2Q86T23 111 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 CD163Q86VB7 1156 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 ZGRF1Q86YA3 2104 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 TMEM251Q8N6I4 163 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 BCORP1Q8N888 145 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 C17orf47Q8NEP4 570 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 OR7G1Q8NGA0 311 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 OR5M3Q8NGP4 307 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 RAB3IL1Q8TBN0 382 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 SPPL2AQ8TCT8 520 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 ASB15Q8WXK1 588 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF524Q96C55 264 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 PPCDCQ96CD2 204 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 TUBGCP3Q96CW5 907 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 COQ8BQ96D53 544 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 OMA1Q96E52 524 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 ELP4Q96EB1 424 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 FAM120BQ96EK7 910 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 C16orf58Q96GQ5 468 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 RBM18Q96H35 190 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 ART5Q96L15 291 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 C5orf34Q96MH7 638 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 C7orf26Q96N11 449 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 GPR137Q96N19 417 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 LMF2Q9BU23 707 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 TTTY12Q9BZ98 90 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 UBQLN3Q9H347 655 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF385DQ9H6B1 395 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 EML4Q9HC35 981 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 GALNT9Q9HCQ5 603 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 MIEF1Q9NQG6 463 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 OLAHQ9NV23 265 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 GPATCH2Q9NW75 528 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 FBXO34Q9NWN3 711 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 NMRK1Q9NWW6 199 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 HPF1Q9NWY4 346 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 NTMQ9P121 344 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 TNFRSF10DQ9UBN6 386 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 BCAP29Q9UHQ4 241 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 TEKT2Q9UIF3 430 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 C19orf53Q9UNZ5 99 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 TRIM33Q9UPN9 1127 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms