RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 PIK3CGP48736 1102 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 ALDH18A1P54886 795 aaKnown RBP7.37□□□□□ -1.23
USP39-216ENST00000490193 GPX6P59796 221 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 SIRPAP78324 504 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 DR1Q01658 176 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 GUCA2AQ02747 115 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 EFR3AQ14156 821 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 EXOSC7Q15024 291 aaKnown RBP7.37□□□□□ -1.23
USP39-216ENST00000490193 CPSF6Q16630 551 aaKnown RBP eCLIP7.37□□□□□ -1.23
USP39-216ENST00000490193 CLEC12BQ2HXU8 276 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 ADAM5Q6NVV9 412 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 DNM1P46Q6ZS02 220 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 FAM214BQ7L5A3 538 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 CHMP1BQ7LBR1 199 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 PAGE2Q7Z2X7 111 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 TBC1D1Q86TI0 1168 aaPredicted RBP7.37□□□□□ -1.23
USP39-216ENST00000490193 ZBED8Q8IZ13 594 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 FADS6Q8N9I5 356 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 ZNF610Q8N9Z0 462 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 ZC3HAV1LQ96H79 300 aaKnown RBP7.37□□□□□ -1.23
USP39-216ENST00000490193 BRINP2Q9C0B6 783 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 OR10A4Q9H209 315 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 SAYSD1Q9NPB0 183 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 BCAP29Q9UHQ4 241 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 DKKL1Q9UK85 242 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 PLLPQ9Y342 182 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 ANGPTL3Q9Y5C1 460 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 PCNX3Q9H6A9 2034 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 A0A087X1B8 175 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 TCRBV9S1A1TA0A576 114 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 EIF3HO15372 352 aaKnown RBP eCLIP7.36□□□□□ -1.23
USP39-216ENST00000490193 GUCY1B2O75343 617 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 REM1O75628 298 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 BCAS2O75934 225 aaPredicted RBP7.36□□□□□ -1.23
USP39-216ENST00000490193 PLAUP00749 431 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 ALDOAP04075 364 aaKnown RBP7.36□□□□□ -1.23
USP39-216ENST00000490193 TP53P04637 393 aaPredicted RBP7.36□□□□□ -1.23
USP39-216ENST00000490193 KLK1P06870 262 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 GSTA2P09210 222 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 CT45A8P0DMV1 189 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 CT45A9P0DMV2 189 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 FCGR2AP12318 317 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 IL11P20809 199 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 CRABP2P29373 138 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 SSTR1P30872 391 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 NEK2P51955 445 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 PNLIPRP2P54317 469 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 RPS4XP62701 263 aaKnown RBP7.36□□□□□ -1.23
USP39-216ENST00000490193 DUSP2Q05923 314 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 GTF2H2Q13888 395 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 VEZF1Q14119 521 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 GANABQ14697 944 aaKnown RBP7.36□□□□□ -1.23
USP39-216ENST00000490193 TRMT12Q53H54 448 aaKnown RBP7.36□□□□□ -1.23
USP39-216ENST00000490193 CT45A2Q5DJT8 189 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 GRTP1Q5TC63 336 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 FRG2Q64ET8 278 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 GTF2H2CQ6P1K8 395 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 STAC2Q6ZMT1 411 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 GOLGA7Q7Z5G4 137 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 CCDC91Q7Z6B0 441 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 CMC1Q7Z7K0 106 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 UBQLNLQ8IYU4 475 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 CENPLQ8N0S6 344 aaPredicted RBP7.36□□□□□ -1.23
USP39-216ENST00000490193 SLC35F6Q8N357 371 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 METTL4Q8N3J2 472 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 METTL25Q8N6Q8 603 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 ADCY4Q8NFM4 1077 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 OR52R1Q8NGF1 315 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 OR6K3Q8NGY3 331 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 FNDC9Q8TBE3 224 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 ZNF675Q8TD23 568 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 PYROXD1Q8WU10 500 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 TMBIM1Q969X1 311 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 ERP27Q96DN0 273 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 CNRIP1Q96F85 164 aaPredicted RBP7.36□□□□□ -1.23
USP39-216ENST00000490193 ZNF681Q96N22 645 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 FRG2BQ96QU4 278 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 ADOQ96SZ5 270 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 PINK1Q9BXM7 581 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 MRPL1Q9BYD6 325 aaKnown RBP7.36□□□□□ -1.23
USP39-216ENST00000490193 REG4Q9BYZ8 158 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 IPPKQ9H8X2 491 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 PLSCR4Q9NRQ2 329 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 AHSPQ9NZD4 102 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 WHRNQ9P202 907 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 PROCRQ9UNN8 238 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 RNF11Q9Y3C5 154 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 TNPO3Q9Y5L0 923 aaKnown RBP7.36□□□□□ -1.23
USP39-216ENST00000490193 PRR14LQ5THK1 2151 aa7.36□□□□□ -1.23
USP39-216ENST00000490193 OR2M5A3KFT3 312 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 H0YC42 278 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 OR7A17O14581 309 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 ERAL1O75616 437 aaKnown RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 CLDN9O95484 217 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 DANCRP0C864 163 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 GFAPP14136 432 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 PCSK2P16519 638 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 TCP1P17987 556 aaKnown RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 PSMB1P20618 241 aaKnown RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 IDUAP35475 653 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms