RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ETS2P15036 469 aa18.02■□□□□ 0.48
CCM2-216ENST00000488727 PCOLCEQ15113 449 aa18.02■□□□□ 0.48
CCM2-216ENST00000488727 ANKRD26P1Q6NSI1 321 aa18.02■□□□□ 0.48
CCM2-216ENST00000488727 VPS37AQ8NEZ2 397 aa18.02■□□□□ 0.48
CCM2-216ENST00000488727 EXOSC8Q96B26 276 aaKnown RBP18.02■□□□□ 0.48
CCM2-216ENST00000488727 CNRIP1Q96F85 164 aaPredicted RBP18.02■□□□□ 0.48
CCM2-216ENST00000488727 MIEF1Q9NQG6 463 aa18.02■□□□□ 0.48
CCM2-216ENST00000488727 EHD3Q9NZN3 535 aa18.02■□□□□ 0.48
CCM2-216ENST00000488727 C19orf25Q9UFG5 118 aaPredicted RBP18.02■□□□□ 0.48
CCM2-216ENST00000488727 RPS6KA6Q9UK32 745 aa18.02■□□□□ 0.48
CCM2-216ENST00000488727 FBXL4Q9UKA2 621 aa18.02■□□□□ 0.48
CCM2-216ENST00000488727 UTS2RQ9UKP6 389 aa18.02■□□□□ 0.48
CCM2-216ENST00000488727 GABRR3A8MPY1 467 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 ERAL1O75616 437 aaKnown RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 SEC24DO94855 1032 aaPredicted RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 SEMG1P04279 462 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 CXADRP78310 365 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 DUSP2Q05923 314 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 PDE7AQ13946 482 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 VEZF1Q14119 521 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 SERTAD2Q14140 314 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 TTC23Q5W5X9 447 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 DGAT2L6Q6ZPD8 337 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 ZNF621Q6ZSS3 439 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 PTOV1Q86YD1 416 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 OFCC1Q8IZS5 231 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 CLECL1Q8IZS7 167 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 OR4K14Q8NGD5 310 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 SNRNP27Q8WVK2 155 aaKnown RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 THAP4Q8WY91 577 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 IP6K3Q96PC2 410 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 BHLHE41Q9C0J9 482 aaPredicted RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 ZNF700Q9H0M5 742 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 REEP4Q9H6H4 257 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 PNO1Q9NRX1 252 aaKnown RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 ERVK-11Q9UQG0 969 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 A8MUA0 341 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 RNASET2O00584 256 aaKnown RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 GNGT2O14610 69 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 CLIC3O95833 236 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 ABCB1P08183 1280 aaPredicted RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 CDH2P19022 906 aaPredicted RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 RPL3P39023 403 aaKnown RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 DCTP40126 519 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 XKP51811 444 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 CDH15P55291 814 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 ST3GAL2Q16842 350 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 ZNF385BQ569K4 471 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 HIPK1Q86Z02 1210 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 GOT1L1Q8NHS2 421 aaPredicted RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 PNPT1Q8TCS8 783 aaKnown RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 NMD3Q96D46 503 aaKnown RBP18.01■□□□□ 0.47
CCM2-216ENST00000488727 ZNF681Q96N22 645 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 GABARAPL1Q9H0R8 117 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 TAS2R7Q9NYW3 318 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 POLHQ9Y253 713 aa18.01■□□□□ 0.47
CCM2-216ENST00000488727 PKD1L2Q7Z442 2459 aa18■□□□□ 0.47
CCM2-216ENST00000488727 NUP214P35658 2090 aaPredicted RBP18■□□□□ 0.47
CCM2-216ENST00000488727 PEX12O00623 359 aa18■□□□□ 0.47
CCM2-216ENST00000488727 CPSF4O95639 269 aaKnown RBP18■□□□□ 0.47
CCM2-216ENST00000488727 CPMP14384 443 aa18■□□□□ 0.47
CCM2-216ENST00000488727 FEN1P39748 380 aaKnown RBP18■□□□□ 0.47
CCM2-216ENST00000488727 STT3AP46977 705 aa18■□□□□ 0.47
CCM2-216ENST00000488727 DEFB109BQ30KR1 87 aa18■□□□□ 0.47
CCM2-216ENST00000488727 DCAF10Q5QP82 559 aa18■□□□□ 0.47
CCM2-216ENST00000488727 PAPD4Q6PIY7 484 aaKnown RBP18■□□□□ 0.47
CCM2-216ENST00000488727 NDUFAF7Q7L592 441 aa18■□□□□ 0.47
CCM2-216ENST00000488727 MBOAT4Q96T53 435 aa18■□□□□ 0.47
CCM2-216ENST00000488727 TPT1P8Q9HAU6 139 aa18■□□□□ 0.47
CCM2-216ENST00000488727 ADAP2Q9NPF8 381 aa18■□□□□ 0.47
CCM2-216ENST00000488727 SLC35C2Q9NQQ7 365 aa18■□□□□ 0.47
CCM2-216ENST00000488727 PSME2Q9UL46 239 aa18■□□□□ 0.47
CCM2-216ENST00000488727 MAGED1Q9Y5V3 778 aaPredicted RBP18■□□□□ 0.47
CCM2-216ENST00000488727 CCDC160A6NGH7 325 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 ARGFXA6NJG6 315 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 IFNA16P05015 189 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 KDELR2P33947 212 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 DYNC1I2Q13409 638 aaKnown RBP17.99■□□□□ 0.47
CCM2-216ENST00000488727 CEBPEQ15744 281 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 MPEG1Q2M385 716 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 RFX4Q33E94 735 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 CBLL1Q75N03 491 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 EIF3MQ7L2H7 374 aaKnown RBP17.99■□□□□ 0.47
CCM2-216ENST00000488727 R3HCC1LQ7Z5L2 792 aaKnown RBP17.99■□□□□ 0.47
CCM2-216ENST00000488727 ZDHHC21Q8IVQ6 265 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 ZFP90Q8TF47 636 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 PTPMT1Q8WUK0 201 aaPredicted RBP17.99■□□□□ 0.47
CCM2-216ENST00000488727 ZNF764Q96H86 408 aaPredicted RBP17.99■□□□□ 0.47
CCM2-216ENST00000488727 IMMP1LQ96LU5 166 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 TOR3AQ9H497 397 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 ZNF160Q9HCG1 818 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 VPS4AQ9UN37 437 aa17.99■□□□□ 0.47
CCM2-216ENST00000488727 NSG1A0A0A6YYJ2 146 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 TBX19O60806 448 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 HPP00738 406 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 SLC35E2P0CK97 266 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 PTGER1P34995 402 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 HLCSP50747 726 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 CDK9P50750 372 aaKnown RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 IST1P53990 364 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms