RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 USP43Q70EL4 1123 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 PEG10Q86TG7 708 aaKnown RBP10.42□□□□□ -0.74
TRIM56-204ENST00000487252 IFNEQ86WN2 208 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 CTAGE3PQ8IX95 158 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 FITM2Q8N6M3 262 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 CCDC63Q8NA47 563 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 OR14L1PQ8NHC6 308 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 HTRA1Q92743 480 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 TCF12Q99081 682 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 TACO1Q9BSH4 297 aaKnown RBP10.42□□□□□ -0.74
TRIM56-204ENST00000487252 SLCO1B3Q9NPD5 702 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 CHRAC1Q9NRG0 131 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 EXO1Q9UQ84 846 aaKnown RBP10.42□□□□□ -0.74
TRIM56-204ENST00000487252 PDE10AQ9Y233 779 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 MAD1L1Q9Y6D9 718 aa10.42□□□□□ -0.74
TRIM56-204ENST00000487252 A0A0G2JN53 185 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 LRIT2A6NDA9 550 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 DPRXA6NFQ7 191 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 CAPN14A8MX76 684 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 SHISA9B4DS77 424 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 TRIM77I1YAP6 450 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 GOLGA8RI6L899 631 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 AP3B1O00203 1094 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 BIRC5O15392 142 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 B3GALT2O43825 422 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 CBR3O75828 277 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 CLPSP04118 112 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 ADH6P28332 368 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 PTGDSP41222 190 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 STT3AP46977 705 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 NPY2RP49146 381 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 STXBP1P61764 594 aaKnown RBP10.41□□□□□ -0.74
TRIM56-204ENST00000487252 BSPH1Q075Z2 132 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 LGALS3BPQ08380 585 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 CTBP1Q13363 440 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 GGTLC2Q14390 218 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 CRYMQ14894 314 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 TTLL9Q3SXZ7 439 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 TRIM40Q6P9F5 258 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 ANGPTL8Q6UXH0 198 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 ASRGL1Q7L266 308 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 TAGAPQ8N103 731 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 WDSUB1Q8N9V3 476 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 C7orf57Q8NEG2 295 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 OR56A3Q8NH54 315 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 NEIL2Q969S2 332 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 FAR2Q96K12 515 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 ACTR8Q9H981 624 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 SERHLQ9NQF3 203 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRIM56-204ENST00000487252 SYBUQ9NX95 663 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 ADAMTS6Q9UKP5 1117 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 CRYL1Q9Y2S2 319 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 MRPS18CQ9Y3D5 142 aaKnown RBP10.41□□□□□ -0.74
TRIM56-204ENST00000487252 ZNF175Q9Y473 711 aa10.41□□□□□ -0.74
TRIM56-204ENST00000487252 MAGEB16A2A368 324 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 E5RI56 91 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 H0YHG0 523 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 NDUFS8O00217 210 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 ERI3O43414 337 aaKnown RBP10.4□□□□□ -0.74
TRIM56-204ENST00000487252 MGRN1O60291 552 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 RAMP1O60894 148 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 TNFRSF21O75509 655 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 DCTN3O75935 186 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 ATP5HO75947 161 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 TBX6O95947 436 aaPredicted RBP10.4□□□□□ -0.74
TRIM56-204ENST00000487252 COX7A2P14406 83 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 PTNP21246 168 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 ALDH3A1P30838 453 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 MAGEA12P43365 314 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 LIMS1P48059 325 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 EFNA4P52798 201 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 SLC37A1P57057 533 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 SESN2P58004 480 aaPredicted RBP10.4□□□□□ -0.74
TRIM56-204ENST00000487252 RIPK1Q13546 671 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 RCN2Q14257 317 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 ADPRMQ3LIE5 342 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 ARMC3Q5W041 872 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 CASC4Q6P4E1 433 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 SLC29A4Q7RTT9 530 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 PIWIL4Q7Z3Z4 852 aaKnown RBP10.4□□□□□ -0.74
TRIM56-204ENST00000487252 KLHDC8AQ8IYD2 350 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 OR6K3Q8NGY3 331 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 PIWIL2Q8TC59 973 aaKnown RBP10.4□□□□□ -0.74
TRIM56-204ENST00000487252 CDKL2Q92772 493 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 S100PBPQ96BU1 408 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 GAL3ST4Q96RP7 486 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 SERINC2Q96SA4 455 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 MCMBPQ9BTE3 642 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 NGBQ9NPG2 151 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 CBLN4Q9NTU7 201 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 TAS2R10Q9NYW0 307 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 BFARQ9NZS9 450 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 SNX8Q9Y5X2 465 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 BIRC6Q9NR09 4857 aa10.4□□□□□ -0.74
TRIM56-204ENST00000487252 ZCWPW2A0A1B0GU75 182 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 OR6C76A6NM76 312 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 SMAD9O15198 467 aaKnown RBP10.39□□□□□ -0.75
TRIM56-204ENST00000487252 TROVE2P10155 538 aaKnown RBP eCLIP10.39□□□□□ -0.75
TRIM56-204ENST00000487252 ZNF23P17027 643 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms