RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 EXOC3L1Q86VI1 746 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 PM20D2Q8IYS1 436 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 LRRC34Q8IZ02 419 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 MARVELD2Q8N4S9 558 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 SIMC1Q8NDZ2 872 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 OR7G2Q8NG99 324 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 OR1J4Q8NGS1 313 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 CEP70Q8NHQ1 597 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 CA5BP1Q8WTZ4 195 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 EXOSC8Q96B26 276 aaKnown RBP6.4□□□□□ -1.38
VPS50-218ENST00000485994 OMA1Q96E52 524 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 PGM2Q96G03 612 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 EGLN2Q96KS0 407 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 PPP3R2Q96LZ3 170 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 AMDHD1Q96NU7 426 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 FAM111AQ96PZ2 611 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 UCN2Q96RP3 112 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 NODALQ96S42 347 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 TIMP4Q99727 224 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 TTYH2Q9BSA4 534 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 PRDM14Q9GZV8 571 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 REEP4Q9H6H4 257 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 SLC24A3Q9HC58 644 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 MIEF1Q9NQG6 463 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 PNPLA3Q9NST1 481 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 SLC17A7Q9P2U7 560 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS50-218ENST00000485994 ATP6V1HQ9UI12 483 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 SH3BGRL2Q9UJC5 107 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 HAO1Q9UJM8 370 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 ACAD8Q9UKU7 415 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 RNF6Q9Y252 685 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 C15orf41Q9Y2V0 281 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 V9GYY5 206 aaPredicted RBP6.4□□□□□ -1.38
VPS50-218ENST00000485994 TACC2O95359 2948 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 SLC35F4A4IF30 521 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 TMEM114B3SHH9 223 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 ZNHIT1O43257 154 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 FADS1O60427 444 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 UGT2B11O75310 529 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 LYPLA1O75608 230 aaPredicted RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 REM1O75628 298 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 TOXO94900 526 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 ACTL6AO96019 429 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 F12P00748 615 aaPredicted RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 CELA3AP09093 270 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 LINC00032P0C843 101 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 DHRS4L1P0CG22 281 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 GLI4P10075 376 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 CREB1P16220 341 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 SDC1P18827 310 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 TACR1P25103 407 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 MAPK1P28482 360 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 GRNP28799 593 aaKnown RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 NTSP30990 170 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 CEACAM8P31997 349 aaPredicted RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 RPL3P39023 403 aaKnown RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 ZFP36L2P47974 494 aaKnown RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 NCBP2P52298 156 aaKnown RBP eCLIP6.39□□□□□ -1.392e-7■■■■□ 26.1
VPS50-218ENST00000485994 SLC18A1P54219 525 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 GAS1P54826 345 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 PSMD4P55036 377 aaKnown RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 NUP107P57740 925 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 C21orf58P58505 322 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 TFF3Q07654 80 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 CRYZQ08257 329 aaKnown RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 PLCXD2Q0VAA5 305 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 PMPCAQ10713 525 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 MAD2L1Q13257 205 aaPredicted RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 GAB1Q13480 694 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 CDSNQ15517 529 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 GLYR1Q49A26 553 aaPredicted RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 EXOSC6Q5RKV6 272 aaKnown RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 FAM219BQ5XKK7 198 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 AP1ARQ63HQ0 302 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 FAM180BQ6P0A1 224 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 ADGRE4PQ86SQ3 457 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 PLCZ1Q86YW0 608 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 NUDCD3Q8IVD9 361 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 ULK2Q8IYT8 1036 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 WDSUB1Q8N9V3 476 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 OR9A2Q8NGT5 310 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 OR2T11Q8NH01 316 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 PSMA8Q8TAA3 256 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 FAM110BQ8TC76 370 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 ZPLD1Q8TCW7 415 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 KAT2AQ92830 837 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 TMBIM1Q969X1 311 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 SDCCAG3Q96C92 435 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 COQ8BQ96D53 544 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 C14orf79Q96F83 325 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 ZBED6CLQ96FA7 236 aaPredicted RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 GNRHR2Q96P88 292 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 LMF2Q9BU23 707 aaKnown RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 EBPLQ9BY08 206 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 CALHM2Q9HA72 323 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 FOLH1BQ9HBA9 442 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 GIN1Q9NXP7 522 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 SPRR3Q9UBC9 169 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 ZNF629Q9UEG4 869 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms