RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SF3A3Q12874 501 aaKnown RBP eCLIP24.61■■□□□ 1.53
CCM2-211ENST00000478582 LASP1Q14847 261 aaKnown RBP24.61■■□□□ 1.53
CCM2-211ENST00000478582 EIF2S3LQ2VIR3 472 aaKnown RBP24.61■■□□□ 1.53
CCM2-211ENST00000478582 TIGD2Q4W5G0 525 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 AGKQ53H12 422 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 TMEM81Q6P7N7 255 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 SULF2Q8IWU5 870 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 FBXW8Q8N3Y1 598 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 TRIML2Q8N7C3 387 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 FAM98AQ8NCA5 519 aaKnown RBP24.61■■□□□ 1.53
CCM2-211ENST00000478582 OR5AK3PQ8NH89 298 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 SPPL2AQ8TCT8 520 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 GRHL3Q8TE85 626 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 HGDQ93099 445 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 VPS33AQ96AX1 596 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 SPDL1Q96EA4 605 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 ITCHQ96J02 903 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 TAAR6Q96RI8 345 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 DUSP22Q9NRW4 184 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 RNF103-CHMP3A0A140T963 221 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 ANKRD33BA6NCL7 494 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 CCDC154A6NI56 674 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 PEX1O43933 1283 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 REM1O75628 298 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 P04436 131 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 ALOX5P09917 674 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 ZCCHC18P0CG32 403 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 DRD4P21917 467 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 PIGAP37287 484 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 TRPC1P48995 793 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 MAN2A2P49641 1150 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 RPP38P78345 283 aaKnown RBP24.6■■□□□ 1.53
CCM2-211ENST00000478582 DUSP5Q16690 384 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 DECR1Q16698 335 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 SAXO2Q658L1 398 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 DNAJB8Q8NHS0 232 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 GPR151Q8TDV0 419 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 FAR1Q8WVX9 515 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 SLC9A6Q92581 669 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 DIO2Q92813 273 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 COL21A1Q96P44 957 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 PHF12Q96QT6 1004 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 NSRP1Q9H0G5 558 aaKnown RBP24.6■■□□□ 1.53
CCM2-211ENST00000478582 PIGUQ9H490 435 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 DEPPQ9NTK1 212 aa24.6■■□□□ 1.53
CCM2-211ENST00000478582 MRTO4Q9UKD2 239 aaKnown RBP24.6■■□□□ 1.53
CCM2-211ENST00000478582 CNOT11Q9UKZ1 510 aaKnown RBP24.6■■□□□ 1.53
CCM2-211ENST00000478582 FAF1Q9UNN5 650 aaPredicted RBP24.6■■□□□ 1.53
CCM2-211ENST00000478582 DOPEY2Q9Y3R5 2298 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 RFXANKO14593 260 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 UGT2B11O75310 529 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 KRT20P35900 424 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 CDKN2CP42773 168 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 PNPLA5Q7Z6Z6 429 aaPredicted RBP24.59■■□□□ 1.53
CCM2-211ENST00000478582 CLEC4FQ8N1N0 589 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 BCORP1Q8N888 145 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 POGLUT1Q8NBL1 392 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 OR5M3Q8NGP4 307 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 MIPOL1Q8TD10 442 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 TSPEARQ8WU66 669 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 GTF2H4Q92759 462 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 NTNG2Q96CW9 530 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 NEURL3Q96EH8 262 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 SLC35A5Q9BS91 424 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 YIPF4Q9BSR8 244 aa24.59■■□□□ 1.53
CCM2-211ENST00000478582 ANKUB1A6NFN9 424 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 NR5A2O00482 541 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 KCNH1O95259 989 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 IL33O95760 270 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 CRYABP02511 175 aaKnown RBP24.58■■□□□ 1.53
CCM2-211ENST00000478582 MEOX1P50221 254 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 MRPS22P82650 360 aaKnown RBP24.58■■□□□ 1.53
CCM2-211ENST00000478582 EFR3AQ14156 821 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 TBCELQ5QJ74 424 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 FAM180AQ6UWF9 173 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 ZNF621Q6ZSS3 439 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 SPATA21Q7Z572 469 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 OR2M7Q8NG81 312 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 PRR7Q8TB68 274 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 FAM110BQ8TC76 370 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 PIK3R3Q92569 461 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 FRMD6Q96NE9 622 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 ADOQ96SZ5 270 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 ELAC2Q9BQ52 826 aaKnown RBP24.58■■□□□ 1.53
CCM2-211ENST00000478582 FAM173AQ9BQD7 235 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 PROK2Q9HC23 129 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 SAR1AQ9NR31 198 aa24.58■■□□□ 1.53
CCM2-211ENST00000478582 A0A1W2PP18 115 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 GXYLT2A0PJZ3 443 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 CD1EP15812 388 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 CAPN3P20807 821 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 MATN1P21941 496 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 PTPN6P29350 595 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 IL12BP29460 328 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 PSMD4P55036 377 aaKnown RBP24.57■■□□□ 1.52
CCM2-211ENST00000478582 GPR85P60893 370 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 ELOAQ14241 798 aaKnown RBP24.57■■□□□ 1.52
CCM2-211ENST00000478582 ZNF324BQ6AW86 544 aaPredicted RBP24.57■■□□□ 1.52
CCM2-211ENST00000478582 CPLX4Q7Z7G2 160 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 ZFP62Q8NB50 900 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms