RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 PRDM14Q9GZV8 571 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 ENKD1Q9H0I2 346 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 SERHLQ9NQF3 203 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 NPDC1Q9NQX5 325 aaPredicted RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 Q9UFV3 132 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 C19orf53Q9UNZ5 99 aaPredicted RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 CAMK2AQ9UQM7 478 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 SLC6A5Q9Y345 797 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 UPK1AO00322 258 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 AKAP10O43572 662 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 TYROBPO43914 113 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 SKAP2O75563 359 aaPredicted RBP9.27□□□□□ -0.93
SF3A3-204ENST00000462258 TOXO94900 526 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 BPGMP07738 259 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 FGF4P08620 206 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 IFI6P09912 130 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 IGFBP2P18065 325 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 MAPK1P28482 360 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 ARRB2P32121 409 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 EVI2BP34910 448 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 GPC1P35052 558 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 GCKP35557 465 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 HPCAL1P37235 193 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 PNLIPRP2P54317 469 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 MRPS22P82650 360 aaKnown RBP9.27□□□□□ -0.93
SF3A3-204ENST00000462258 PDE7AQ13946 482 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 ZNHIT3Q15649 155 aaPredicted RBP9.27□□□□□ -0.93
SF3A3-204ENST00000462258 RFTN2Q52LD8 501 aaPredicted RBP9.27□□□□□ -0.93
SF3A3-204ENST00000462258 ZNF385BQ569K4 471 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 XKR7Q5GH72 579 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 VASNQ6EMK4 673 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 ZNF551Q7Z340 670 aaPredicted RBP9.27□□□□□ -0.93
SF3A3-204ENST00000462258 SZRD1Q7Z422 152 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 WDR53Q7Z5U6 358 aaPredicted RBP9.27□□□□□ -0.93
SF3A3-204ENST00000462258 YRDCQ86U90 279 aaKnown RBP9.27□□□□□ -0.93
SF3A3-204ENST00000462258 LACC1Q8IV20 430 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 CLYBLQ8N0X4 340 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 WDSUB1Q8N9V3 476 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 ZFP28Q8NHY6 868 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 RNF138Q8WVD3 245 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 CIDECQ96AQ7 238 aaPredicted RBP9.27□□□□□ -0.93
SF3A3-204ENST00000462258 ELP4Q96EB1 424 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 PKNOX2Q96KN3 472 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 DOCK7Q96N67 2140 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 TIMP4Q99727 224 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 TREX2Q9BQ50 279 aaPredicted RBP9.27□□□□□ -0.93
SF3A3-204ENST00000462258 LMF2Q9BU23 707 aaKnown RBP9.27□□□□□ -0.93
SF3A3-204ENST00000462258 PARD6BQ9BYG5 372 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 OR2B2Q9GZK3 357 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 REEP4Q9H6H4 257 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 Q9N2J8 555 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 KCNJ16Q9NPI9 418 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 GIMAP2Q9UG22 337 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 TRAF6Q9Y4K3 522 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 MED12Q93074 2177 aa9.27□□□□□ -0.93
SF3A3-204ENST00000462258 CREBBPQ92793 2442 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 KDM4EB2RXH2 506 aaPredicted RBP9.26□□□□□ -0.93
SF3A3-204ENST00000462258 TMEM114B3SHH9 223 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 RGS16O15492 202 aaPredicted RBP9.26□□□□□ -0.93
SF3A3-204ENST00000462258 SCO2O43819 266 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 TBX19O60806 448 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 CBR3O75828 277 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 ACTL6AO96019 429 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 BCKDHAP12694 445 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 CYP4B1P13584 511 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 BMP7P18075 431 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 GRK2P25098 689 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 SSTR2P30874 369 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 SRD5A2P31213 254 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 ETV4P43268 484 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 ASMTP46597 345 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 RFX3P48380 749 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 SERPINB4P48594 390 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 WNT3P56703 355 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 DECR1Q16698 335 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 SLC25A35Q3KQZ1 300 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 UGT3A2Q3SY77 523 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 CYP27C1Q4G0S4 372 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 ATP6AP1LQ52LC2 224 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 SEM1Q6ZVN7 128 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 IFNEQ86WN2 208 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 PLCZ1Q86YW0 608 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 ZNF295-AS1Q8N0V1 137 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 OR14L1PQ8NHC6 308 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 PPP1R14CQ8TAE6 165 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 ABTB1Q969K4 478 aaPredicted RBP9.26□□□□□ -0.93
SF3A3-204ENST00000462258 DTNBP1Q96EV8 351 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 C14orf79Q96F83 325 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 ZBED6CLQ96FA7 236 aaPredicted RBP9.26□□□□□ -0.93
SF3A3-204ENST00000462258 LURAP1Q96LR2 239 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 PPP3R2Q96LZ3 170 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 MS4A4EQ96PG1 132 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 EQTNQ9NQ60 294 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 SH3BP4Q9P0V3 963 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 BAIAP2L1Q9UHR4 511 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 DKKL1Q9UK85 242 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 FBXL2Q9UKC9 423 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 RAB21Q9UL25 225 aa9.26□□□□□ -0.93
SF3A3-204ENST00000462258 CBLCQ9ULV8 474 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms