RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 VPS39Q96JC1 886 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 FAM167BQ9BTA0 163 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 ZNF747Q9BV97 191 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 PITHD1Q9GZP4 211 aaPredicted RBP11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 STMN4Q9H169 189 aaPredicted RBP11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 PPCSQ9HAB8 311 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 SAYSD1Q9NPB0 183 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 MS4A12Q9NXJ0 267 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 TAS2R13Q9NYV9 303 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 FBXL2Q9UKC9 423 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 PCDHGB1Q9Y5G3 927 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 VWC2LB2RUY7 222 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 SHISA9B4DS77 424 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 TRIM77I1YAP6 450 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 SEC14L5O43304 696 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 AQP8O94778 261 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 TLX1P31314 330 aaPredicted RBP11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 TTKP33981 857 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 GALNSP34059 522 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 ELK3P41970 407 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 NR4A2P43354 598 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 MAGEA4P43358 317 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 CDH11P55287 796 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 B3GALT5-AS1P59052 145 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 IL2P60568 153 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 TIAL1Q01085 375 aaKnown RBP eCLIP11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 SGCBQ16585 318 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 AWAT1Q58HT5 328 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 C11orf71Q6IPW1 123 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 VN1R5Q7Z5H4 357 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 UBE3DQ7Z6J8 389 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 CCDC25Q86WR0 208 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 ZNF619Q8N2I2 560 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 MREGQ8N565 214 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 C17orf47Q8NEP4 570 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 AENQ8WTP8 325 aaKnown RBP11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 ZNF669Q96BR6 464 aaPredicted RBP11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 FUT8Q9BYC5 575 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 PRRG4Q9BZD6 226 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 CHMP2BQ9UQN3 213 aa11.21□□□□□ -0.61
AC004540.1-204ENST00000449537 EXPH5Q8NEV8 1989 aa11.21□□□□□ -0.62
AC004540.1-204ENST00000449537 TRRAPQ9Y4A5 3859 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 PRAMEF25A6NGN4 478 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 RTCAO00442 366 aaKnown RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 GPR75O95800 540 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 ENO2P09104 434 aaPredicted RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 HIST1H1TP22492 207 aaPredicted RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 IL32P24001 234 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 CNTFP26441 200 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 PDLIM4P50479 330 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 RPS3AP61247 264 aaKnown RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 IRF9Q00978 393 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 HMGCS1Q01581 520 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 SLAMF1Q13291 335 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 IQCCQ4KMZ1 466 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 MSS51Q4VC12 460 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 DEPDC1Q5TB30 811 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 FIGNL1Q6PIW4 674 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 PEG10Q86TG7 708 aaKnown RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 CNTN4Q8IWV2 1026 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 FBXL14Q8N1E6 418 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 GOLGA6L1Q8N7Z2 621 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 ZNF418Q8TF45 676 aaPredicted RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 GFM2Q969S9 779 aaKnown RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 CERS2Q96G23 380 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 GMPPAQ96IJ6 420 aaPredicted RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 NDNQ99608 321 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 RBM4Q9BWF3 364 aaKnown RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 NXF5Q9H1B4 397 aaKnown RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 CDC42EP4Q9H3Q1 356 aaKnown RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 FOLH1BQ9HBA9 442 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 FBXO5Q9UKT4 447 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 ZNF490Q9ULM2 529 aaPredicted RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 CORO1CQ9ULV4 474 aaPredicted RBP11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 CLEC4AQ9UMR7 237 aa11.2□□□□□ -0.62
AC004540.1-204ENST00000449537 IGHV4-61A0A0C4DH41 118 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 ZCWPW2A0A1B0GU75 182 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 H7C417 338 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 NDUFS8O00217 210 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 SLC35E2BP0CK96 405 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 SLC35E2P0CK97 266 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 SLC1A2P43004 574 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 LGALS3BPQ08380 585 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 TRADDQ15628 312 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 TSC22D1Q15714 1073 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 C18orf63Q68DL7 685 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 OR5M10Q6IEU7 315 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 ADNP2Q6IQ32 1131 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 PPP4R4Q6NUP7 873 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 GPR180Q86V85 440 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 EXOC3L1Q86VI1 746 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 MUC15Q8N387 334 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 ZNF615Q8N8J6 731 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 OMA1Q96E52 524 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 USB1Q9BQ65 265 aaKnown RBP11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 PIMREGQ9BSJ6 248 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 TXLNGYQ9BZA5 131 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 OR10A5Q9H207 317 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 METTL17Q9H7H0 456 aaPredicted RBP11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 CXorf21Q9HAI6 301 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms