RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312		H0YIV9	168 aa		11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	RNGTT	O60942	597 aa	Known RBP	11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	PCCB	P05166	539 aa		11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	SSR2	P43308	183 aa		11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	SLC6A11	P48066	632 aa		11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	FAM92B	Q6ZTR7	304 aa		11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	SPRED2	Q7Z698	418 aa		11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	TMEM145	Q8NBT3	493 aa		11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	NEIL3	Q8TAT5	605 aa		11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	SECISBP2	Q96T21	854 aa	Known RBP	11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	PPIL3	Q9H2H8	161 aa	Known RBP	11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	KLHL31	Q9H511	634 aa		11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	SLC13A4	Q9UKG4	626 aa		11.81	□□□□□ -0.52
DDR1-238	ENST00000446312	FAM170B	A6NMN3	283 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	NPC1	O15118	1278 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	PGRMC2	O15173	223 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	INHA	P05111	366 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	CD3G	P09693	182 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	ERVK-21	P61565	698 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	LTB4R	Q15722	352 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	ZNF630	Q2M218	657 aa	Predicted RBP	11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	PRAMEF14	Q5SWL7	426 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	LCN1P1	Q5VSP4	162 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	PRAMEF13	Q5VWM6	474 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	OTP	Q5XKR4	325 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	OR8D4	Q8NGM9	314 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	FIBIN	Q8TAL6	211 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	VOPP1	Q96AW1	172 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	ECHDC3	Q96DC8	303 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	RIPOR3	Q96MK2	946 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	IFT46	Q9NQC8	304 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	EXTL2	Q9UBQ6	330 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	HCN2	Q9UL51	889 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	PLEKHM1	Q9Y4G2	1056 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	HMX3	A6NHT5	357 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	HMGN4	O00479	90 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	SLC30A4	O14863	429 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	LCMT2	O60294	686 aa	Known RBP	11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	HRG	P04196	525 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	PPIB	P23284	216 aa	Known RBP	11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	DDOST	P39656	456 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	MAGEB1	P43366	347 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	FAM71E1	Q6IPT2	247 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	ZC3H14	Q6PJT7	736 aa	Known RBP	11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	PARS2	Q7L3T8	475 aa	Known RBP	11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	VN1R5	Q7Z5H4	357 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	TRIM69	Q86WT6	500 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	NKAIN4	Q8IVV8	208 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	VWA5B2	Q8N398	1253 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	NANOGP1	Q8N7R0	232 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	ZSWIM3	Q96MP5	696 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	CDCA4	Q9BXL8	241 aa		11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	NXF2	Q9GZY0	626 aa	Known RBP	11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	DDX31	Q9H8H2	851 aa	Known RBP	11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	COL4A4	P53420	1690 aa	Predicted RBP	11.8	□□□□□ -0.52
DDR1-238	ENST00000446312	ZNF860	A6NHJ4	632 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	SLCO2B1	O94956	709 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	PTHLH	P12272	177 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	TRIM23	P36406	574 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	CDH11	P55287	796 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	RPL6	Q02878	288 aa	Known RBP	11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	FCN2	Q15485	313 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	C9orf64	Q5T6V5	341 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	NXPE4	Q6UWF7	544 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	KIF18B	Q86Y91	864 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	UXS1	Q8NBZ7	420 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	SENP5	Q96HI0	755 aa	Predicted RBP	11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	NKX3-1	Q99801	234 aa	Predicted RBP	11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	CORO2B	Q9UQ03	480 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	KCNK6	Q9Y257	313 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	GRIP1	Q9Y3R0	1128 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	OR1A2	Q9Y585	309 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	HEATR5B	Q9P2D3	2071 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	HYKK	A2RU49	373 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	OR52A4P	A6NMU1	304 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	AGAP14	A8MT82	685 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	AKAP8	O43823	692 aa	Known RBP	11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	GKN3P	P0CG01	181 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	VIPR1	P32241	457 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	NNMT	P40261	264 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	GDI2	P50395	445 aa	Known RBP	11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	DUSP2	Q05923	314 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	PCDH1	Q08174	1060 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	KRT33B	Q14525	404 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	PLPP4	Q5VZY2	271 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	C18orf63	Q68DL7	685 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	TMEM65	Q6PI78	240 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	ZNF767P	Q75MW2	155 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	GPR155	Q7Z3F1	870 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	RD3	Q7Z3Z2	195 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	CBARP	Q8N350	705 aa	Predicted RBP	11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	SAMD12	Q8N8I0	201 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	OR10H4	Q8NGA5	316 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	OR8J1	Q8NGP2	316 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	DEFB118	Q96PH6	123 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	GAL3ST1	Q99999	423 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	TAPBPL	Q9BX59	468 aa		11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.79	□□□□□ -0.52
DDR1-238	ENST00000446312	SLC6A17	Q9H1V8	727 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms