RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RAD1O60671 282 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 GCM2O75603 506 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 BCAS2O75934 225 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 IGKV3-11P04433 115 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 CYC1P08574 325 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 RAB40ALP0C0E4 278 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 TFPTP0C1Z6 253 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 NCK1P16333 377 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 GGT1P19440 569 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 TCN2P20062 427 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 SDHBP21912 280 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 MATN1P21941 496 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 RBMS1P29558 406 aaKnown RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 MAP3K8P41279 467 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 STAT5AP42229 794 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 MAGEA8P43361 318 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 EMDP50402 254 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 GPR143P51810 404 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 PGDP52209 483 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 ELF3P78545 371 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 PRR5P85299 388 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 TRAP1Q12931 704 aaKnown RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 FADDQ13158 208 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 CCNIQ14094 377 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 LASP1Q14847 261 aaKnown RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 KPNB1Q14974 876 aaKnown RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 VMACQ2NL98 169 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 SFT2D3Q587I9 215 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 SFRP5Q5T4F7 317 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 GCNT6Q5T4J0 391 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 TNFAIP8L2Q6P589 184 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 BHLHB9Q6PI77 547 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 ANGPTL8Q6UXH0 198 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 C22orf34Q6ZV56 151 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 SZRD1Q7Z422 152 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 WDR53Q7Z5U6 358 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 PTRH1Q86Y79 214 aaKnown RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 MICU2Q8IYU8 434 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 NLGN4XQ8N0W4 816 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 ESX1Q8N693 406 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 SLC16A11Q8NCK7 471 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 NFAM1Q8NET5 270 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 NLGN4YQ8NFZ3 816 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 OR7G1Q8NGA0 311 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 OR5D16Q8NGK9 328 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 OR2Y1Q8NGV0 311 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 ZNF721Q8TF20 911 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 RAB8BQ92930 207 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 MAL2Q969L2 176 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 RELTQ969Z4 430 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 ASB9Q96DX5 294 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 SLC35A4Q96G79 324 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 SENP5Q96HI0 755 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 REXO5Q96IC2 774 aaKnown RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 FBXL20Q96IG2 436 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 SLC35G5Q96KT7 338 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 ZNF578Q96N58 590 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 MS4A4EQ96PG1 132 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 WDR77Q9BQA1 342 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 CNPPD1Q9BV87 410 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 NUDT9Q9BW91 350 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 ACTRT3Q9BYD9 372 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 OR10A5Q9H207 317 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 OR51I1Q9H343 314 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 RAD21L1Q9H4I0 556 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 TMEM38AQ9H6F2 299 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 A4GALTQ9NPC4 353 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 ADAP2Q9NPF8 381 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 EQTNQ9NQ60 294 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 ERVK-19Q9WJR5 959 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 FARSAQ9Y285 508 aaKnown RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 GPR55Q9Y2T6 319 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 PTRH2Q9Y3E5 179 aaKnown RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 CLCA3PQ9Y6N3 262 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 VPS13AQ96RL7 3174 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 ASXL3Q9C0F0 2248 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 CABIN1Q9Y6J0 2220 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 SNRNP200O75643 2136 aaKnown RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 MYO15AQ9UKN7 3530 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 LOC101059948A0A1B0GTJ6 334 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ELOVL7A1L3X0 281 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 SYNDIG1LA6NDD5 238 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 STMND1H3BQB6 276 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ARPC2O15144 300 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ENTPD5O75356 428 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 CIB2O75838 187 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 CD63P08962 238 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 OR12D1P0DN82 309 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ACP2P11117 423 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ATP6V1B2P21281 511 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 F8A1P23610 371 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 PCGF2P35227 344 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 FOLR3P41439 243 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ECI1P42126 302 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 PRIM2P49643 509 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 KHKP50053 298 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ERFP50548 548 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 CRYBA2P53672 197 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 SLC37A1P57057 533 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 DSTNP60981 165 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms