RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TAF7Q15545 349 aaPredicted RBP2.27□□□□□ -2.05
PTPN4-205ENST00000433888 TRADDQ15628 312 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 ADPRMQ3LIE5 342 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 TCHHL1Q5QJ38 904 aaPredicted RBP2.27□□□□□ -2.05
PTPN4-205ENST00000433888 ZNF776Q68DI1 518 aaPredicted RBP2.27□□□□□ -2.05
PTPN4-205ENST00000433888 SNRNP48Q6IEG0 339 aaKnown RBP2.27□□□□□ -2.05
PTPN4-205ENST00000433888 CES3Q6UWW8 571 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 GPR137CQ8N3F9 429 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 MINDY2Q8NBR6 621 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 RNF149Q8NC42 400 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 OR2T34Q8NGX1 318 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 C8orf46Q8TAG6 207 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 N4BP2L2Q92802 583 aaPredicted RBP2.27□□□□□ -2.05
PTPN4-205ENST00000433888 TMEM45BQ96B21 275 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 FAF2Q96CS3 445 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 RAB39BQ96DA2 213 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 COG3Q96JB2 828 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 C4orf36Q96KX1 117 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 MAGEB18Q96M61 343 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 GPR137Q96N19 417 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 GUCD1Q96NT3 240 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 RAB33BQ9H082 229 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 CALHM2Q9HA72 323 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 SLC25A19Q9HC21 320 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 AMBNQ9NP70 447 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 POLE3Q9NRF9 147 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 TECRQ9NZ01 308 aaKnown RBP2.27□□□□□ -2.05
PTPN4-205ENST00000433888 ZNF319Q9P2F9 582 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 DIMT1Q9UNQ2 313 aaKnown RBP2.27□□□□□ -2.05
PTPN4-205ENST00000433888 TRIOBPQ9H2D6 2365 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 A0A087WZY1 265 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 ATP6AP2A0A1C7CYW4 349 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 OR5H15A6NDH6 313 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 ZFP92A6NM28 416 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 GMFGO60234 142 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 MTX2O75431 263 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 VPS26AO75436 327 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 CLN5O75503 358 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 APBB3O95704 486 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 SFTPBP07988 381 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 CCDC159P0C7I6 412 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 PGAM2P15259 253 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 ATP6V1C1P21283 382 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 HNRNPA2B1P22626 353 aaKnown RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 PSMA5P28066 241 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 PBLDP30039 288 aaPredicted RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 STIP1P31948 543 aaKnown RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 PRPHP41219 470 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 ASMTP46597 345 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 NPY2RP49146 381 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 RPS4XP62701 263 aaKnown RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 CCZ1BP86790 482 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 CCZ1P86791 482 aaPredicted RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 SNTB2Q13425 540 aaKnown RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 TSTA3Q13630 321 aaPredicted RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 DPYSQ14117 519 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 CLPPQ16740 277 aaPredicted RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 RTL6Q6ICC9 239 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 CAPN13Q6MZZ7 669 aaPredicted RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 CDC42EP5Q6NZY7 148 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 CASC1Q6TDU7 716 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 KDELC1Q6UW63 502 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 ZNF730Q6ZMV8 503 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 RFPL4BQ6ZWI9 263 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 YRDCQ86U90 279 aaKnown RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 CACUL1Q86Y37 369 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 MISPQ8IVT2 679 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 ENTHD1Q8IYW4 607 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 CEND1Q8N111 149 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 RNF148Q8N7C7 305 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 Q8N9L7 120 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 SIDT2Q8NBJ9 832 aaKnown RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 TBCKQ8TEA7 893 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 MRPL24Q96A35 216 aaKnown RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 RPGRIP1Q96KN7 1286 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 TCEANC2Q96MN5 208 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 SSX3Q99909 188 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 SCRT1Q9BWW7 348 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 GON7Q9BXV9 100 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 SLC26A1Q9H2B4 701 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 IKZF5Q9H5V7 419 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 ZDHHC6Q9H6R6 413 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 NT5DC2Q9H857 520 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 ECT2Q9H8V3 914 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 VAT1LQ9HCJ6 419 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 HPS4Q9NQG7 708 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 TMEM9Q9P0T7 183 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 RCOR3Q9P2K3 495 aaPredicted RBP2.26□□□□□ -2.05
PTPN4-205ENST00000433888 LAMP5Q9UJQ1 280 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 SNX6Q9UNH7 406 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 SMC3Q9UQE7 1217 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 RNF24Q9Y225 148 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 KLHDC2Q9Y2U9 406 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 MFHAS1Q9Y4C4 1052 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 RNF115Q9Y4L5 304 aa2.26□□□□□ -2.05
PTPN4-205ENST00000433888 LRRK1Q38SD2 2015 aa2.25□□□□□ -2.05
PTPN4-205ENST00000433888 UBE4BO95155 1302 aa2.25□□□□□ -2.05
PTPN4-205ENST00000433888 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
PTPN4-205ENST00000433888 FAM230AA0A1W2PPH8 454 aa2.25□□□□□ -2.05
PTPN4-205ENST00000433888 PINLYPA6NC86 204 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms