RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 LCN1P31025 176 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 PIGAP37287 484 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 SOX3P41225 446 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 MAN2A2P49641 1150 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 RASSF2P50749 326 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 SLC7A2P52569 658 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 MVDP53602 400 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 PSME3P61289 254 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 EFR3AQ14156 821 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 DNAL1Q4LDG9 190 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 PIGGQ5H8A4 983 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 COX20Q5RI15 118 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 DCST2Q5T1A1 773 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 NANOGP8Q6NSW7 305 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 ERICH5Q6P6B1 374 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 C6orf89Q6UWU4 347 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 CCDC121Q6ZUS5 278 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 SERPINA11Q86U17 422 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 SLC30A8Q8IWU4 369 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 PIK3R3Q92569 461 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 EXTL1Q92935 676 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 TMBIM1Q969X1 311 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 OTUB1Q96FW1 271 aaPredicted RBP10.16□□□□□ -0.78
CHD4-202ENST00000430771 SLC35A4Q96G79 324 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 LMF1Q96S06 567 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 SMAD5Q99717 465 aaKnown RBP10.16□□□□□ -0.78
CHD4-202ENST00000430771 ECSITQ9BQ95 431 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 GPATCH1Q9BRR8 931 aaKnown RBP10.16□□□□□ -0.78
CHD4-202ENST00000430771 ADNPQ9H2P0 1102 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 IKZF5Q9H5V7 419 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 NANOGQ9H9S0 305 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 LIN28AQ9H9Z2 209 aaKnown RBP10.16□□□□□ -0.78
CHD4-202ENST00000430771 CACYBPQ9HB71 228 aaKnown RBP10.16□□□□□ -0.78
CHD4-202ENST00000430771 POLE3Q9NRF9 147 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 CALML5Q9NZT1 146 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 ABCD2Q9UBJ2 740 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 TUBD1Q9UJT1 453 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 LIPT1Q9Y234 373 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 ANGPT4Q9Y264 503 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 ZNF451Q9Y4E5 1061 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 NPFFR2Q9Y5X5 522 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 MED13Q9UHV7 2174 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 CELSR3Q9NYQ7 3312 aa10.16□□□□□ -0.78
CHD4-202ENST00000430771 OR5H15A6NDH6 313 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 OR6C70A6NIJ9 312 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 B2RBV5 119 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 C5orf58C9J3I9 102 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 TP53I11O14683 189 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 REM1O75628 298 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 KCNK2O95069 426 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 IL33O95760 270 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 BCHEP06276 602 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 ARAFP10398 606 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 ETFAP13804 333 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 RFX3P48380 749 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 CYB561P49447 251 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 CRISP3P54108 245 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 CASP9P55211 416 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 ARG2P78540 354 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 OC90Q02509 493 aaPredicted RBP10.15□□□□□ -0.78
CHD4-202ENST00000430771 RBBP4Q09028 425 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 BNIP1Q12981 228 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 SELPLGQ14242 412 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.15□□□□□ -0.78
CHD4-202ENST00000430771 ZNF630Q2M218 657 aaPredicted RBP10.15□□□□□ -0.78
CHD4-202ENST00000430771 ARHGAP11BQ3KRB8 267 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 GPAT3Q53EU6 434 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 RABL3Q5HYI8 236 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 HEPHL1Q6MZM0 1159 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 C8orf82Q6P1X6 216 aaPredicted RBP10.15□□□□□ -0.78
CHD4-202ENST00000430771 BNC2Q6ZN30 1099 aaPredicted RBP10.15□□□□□ -0.78
CHD4-202ENST00000430771 RTL4Q6ZR62 310 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 LINC00696Q6ZRV3 163 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 PRR22Q8IZ63 422 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 CYP4Z2PQ8N1L4 340 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 METTL25Q8N6Q8 603 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 AMER2Q8N7J2 671 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 BCORP1Q8N888 145 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 C11orf65Q8NCR3 313 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 RBM15BQ8NDT2 890 aaKnown RBP10.15□□□□□ -0.78
CHD4-202ENST00000430771 CHDHQ8NE62 594 aaPredicted RBP10.15□□□□□ -0.78
CHD4-202ENST00000430771 TNIP2Q8NFZ5 429 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 XAGE5Q8WWM1 108 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 DIO2Q92813 273 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 RAB8BQ92930 207 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 TMEM125Q96AQ2 219 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 UTP23Q9BRU9 249 aaKnown RBP10.15□□□□□ -0.78
CHD4-202ENST00000430771 ZNF350Q9GZX5 532 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 C1orf21Q9H246 121 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 TMEM38AQ9H6F2 299 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 KAT8Q9H7Z6 458 aaKnown RBP10.15□□□□□ -0.78
CHD4-202ENST00000430771 A4GALTQ9NPC4 353 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 STMN3Q9NZ72 180 aa10.15□□□□□ -0.78
CHD4-202ENST00000430771 ANKRD11Q6UB99 2663 aaPredicted RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 GXYLT2A0PJZ3 443 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 SLC28A2O43868 658 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 MAN1A2O60476 641 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 TNFRSF21O75509 655 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 STX11O75558 287 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 OR6B1O95007 311 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms