RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 COX10Q12887 443 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 NKAIN1Q4KMZ8 207 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 CYBRD1Q53TN4 286 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 OR4C11Q6IEV9 310 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 USP43Q70EL4 1123 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 VTCN1Q7Z7D3 282 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 JAZF1Q86VZ6 243 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 ZZZ3Q8IYH5 903 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 LRRC25Q8N386 305 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 LRRC17Q8N6Y2 441 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 IL4I1Q96RQ9 567 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 UTP23Q9BRU9 249 aaKnown RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 TMEM185BQ9H7F4 350 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 TIGARQ9NQ88 270 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 RABL2AQ9UBK7 228 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF831Q5JPB2 1677 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 GREB1LQ9C091 1923 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 C1orf226A1L170 272 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 ANKRD34BA5PLL1 514 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 MROH6A6NGR9 719 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 CHST10O43529 356 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 IGLV3-27P01718 113 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 ICAM2P13598 275 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 TMEM35AQ53FP2 167 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 IKBIPQ70UQ0 350 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 HMGN2P46Q86SG4 172 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 NAXDQ8IW45 347 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 PIK3R3Q92569 461 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 RDH12Q96NR8 316 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 RBM38Q9H0Z9 239 aaKnown RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 ERVK13-1Q9NX77 482 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 ING4Q9UNL4 249 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 MRPS7Q9Y2R9 242 aaKnown RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 ZNFX1Q9P2E3 1918 aaKnown RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 GADD45GO95257 159 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 CSTAP01040 98 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 BCHEP06276 602 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 DCTP40126 519 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 OR1E2P47887 323 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 DDI2Q5TDH0 399 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 AFMIDQ63HM1 303 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 PAPD4Q6PIY7 484 aaKnown RBP10.04□□□□□ -0.8
TCOF1-204ENST00000427724 PHC2Q8IXK0 858 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 LGI4Q8N135 537 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 CNEP1R1Q8N9A8 125 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 UXS1Q8NBZ7 420 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 GPR150Q8NGU9 434 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 NETO1Q8TDF5 533 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 PCED1AQ9H1Q7 454 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF71Q9NQZ8 489 aaPredicted RBP10.04□□□□□ -0.8
TCOF1-204ENST00000427724 POLHQ9Y253 713 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 PCDHA9Q9Y5H5 950 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 TRBV11-1A0A0K0K1C0 115 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 C17orf113A0A1B0GUU1 675 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 FADS2P1A8MWK0 482 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 C1orf105O95561 183 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 PEPDP12955 493 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 GSTM2P28161 218 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
TCOF1-204ENST00000427724 PTGER1P34995 402 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 IDUAP35475 653 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 SNRPD2P62316 118 aaKnown RBP10.04□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF311Q5JNZ3 666 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 TMEM215Q68D42 235 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 SMARCD3Q6STE5 483 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 PLPP6Q8IY26 295 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 SPARTQ8N0X7 666 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 SIRT6Q8N6T7 355 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 OR56A1Q8NGH5 318 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 OR2T11Q8NH01 316 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 WASH6PQ9NQA3 447 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 ERVK-19Q9WJR5 959 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 PCDHB14Q9Y5E9 798 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 C2orf92A0A1B0GVN3 265 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 AKAP8O43823 692 aaKnown RBP10.04□□□□□ -0.8
TCOF1-204ENST00000427724 CISD3P0C7P0 127 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 PSKH1P11801 424 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 MTHFD2P13995 350 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 EPHA8P29322 1005 aaPredicted RBP10.04□□□□□ -0.8
TCOF1-204ENST00000427724 SELENOVP59797 346 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 DCST1Q5T197 706 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 KIAA1614Q5VZ46 1190 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 TMEM107Q6UX40 140 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 DNAJB8Q8NHS0 232 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 TEX47Q8TBZ9 253 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 NEK7Q8TDX7 302 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 TEFMQ96QE5 360 aaKnown RBP10.04□□□□□ -0.8
TCOF1-204ENST00000427724 CD180Q99467 661 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 INPP5KQ9BT40 448 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 TRPV4Q9HBA0 871 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 CPNE5Q9HCH3 593 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 MKI67P46013 3256 aaKnown RBP10.04□□□□□ -0.8
TCOF1-204ENST00000427724 ZFAND5O76080 213 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 AGR2O95994 175 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 GDF1P27539 372 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 SLC9A3P48764 834 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 DSTNP60981 165 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 RIN1Q13671 783 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 SCARB2Q14108 478 aa10.04□□□□□ -0.8
TCOF1-204ENST00000427724 GBX1Q14549 363 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms