RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GNB5O14775 395 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 ZNHIT1O43257 154 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 EMC8O43402 210 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 SUSD5O60279 629 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 NME6O75414 186 aaPredicted RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 KCNH1O95259 989 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 G6PDP11413 515 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 LBPP18428 481 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 FRKP42685 505 aaPredicted RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 CLK3P49761 638 aaKnown RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 PNLIPRP2P54317 469 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 PRKAG1P54619 331 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 PSG6Q00889 435 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 GUCA2AQ02747 115 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 MLC1Q15049 377 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 TOMM20Q15388 145 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 LSM12Q3MHD2 195 aaKnown RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 SPDYE7PQ495Y7 208 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 TMEM211Q6ICI0 200 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 ANGPTL8Q6UXH0 198 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 NPSR1Q6W5P4 371 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 MAMDC2Q7Z304 686 aaPredicted RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 MRGPRGQ86SM5 289 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 DOLPP1Q86YN1 238 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 CHERPQ8IWX8 916 aaKnown RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 LRRC34Q8IZ02 419 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 ZNF808Q8N4W9 903 aaPredicted RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 CDRT4Q8N9R6 151 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 NUP43Q8NFH3 380 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 OR7A2PQ8NGA2 310 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 OR1J4Q8NGS1 313 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 GPR151Q8TDV0 419 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 EFHD2Q96C19 240 aaPredicted RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 ATP6V1G3Q96LB4 118 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 MS4A4EQ96PG1 132 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 NODALQ96S42 347 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 USB1Q9BQ65 265 aaKnown RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 VKORC1Q9BQB6 163 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 LMF2Q9BU23 707 aaKnown RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 ACKR4Q9NPB9 350 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 EQTNQ9NQ60 294 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 PNPOQ9NVS9 261 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 CBLCQ9ULV8 474 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 C15orf41Q9Y2V0 281 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 SNX8Q9Y5X2 465 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 RELNP78509 3460 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 A0A1B0GVC2 190 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 HDAC3O15379 428 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 CFLARO15519 480 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 TSPAN2O60636 221 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 ICOSLGO75144 302 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 PSMG1O95456 288 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 CELA3AP09093 270 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 RFPL3SP0C7P2 107 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 LAMP1P11279 417 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 EFNA1P20827 205 aaPredicted RBP10.01□□□□□ -0.81
USP49-204ENST00000423567 GABRA3P34903 492 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 RFX3P48380 749 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 PRIM2P49643 509 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 CDK9P50750 372 aaKnown RBP10.01□□□□□ -0.81
USP49-204ENST00000423567 MMP16P51512 607 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 CLDN8P56748 225 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 PGS1Q32NB8 556 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 GXYLT1Q4G148 440 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 WLSQ5T9L3 541 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 TIGD3Q6B0B8 471 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 XKRXQ6PP77 449 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 FGD2Q7Z6J4 655 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 KRTCAP2Q8N6L1 136 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 OR4N2Q8NGD1 307 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 PHF10Q8WUB8 498 aaKnown RBP10.01□□□□□ -0.81
USP49-204ENST00000423567 OR5P2Q8WZ92 322 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 SLC9A6Q92581 669 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 ARL8AQ96BM9 186 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 CHMP6Q96FZ7 201 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 DUSP26Q9BV47 211 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 DPY30Q9C005 99 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 BHLHE41Q9C0J9 482 aaPredicted RBP10.01□□□□□ -0.81
USP49-204ENST00000423567 VIPAS39Q9H9C1 493 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 MEAF6Q9HAF1 191 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 NEUROD4Q9HD90 331 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 ZCCHC3Q9NUD5 404 aaKnown RBP10.01□□□□□ -0.81
USP49-204ENST00000423567 LIPGQ9Y5X9 500 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 ZGRF1Q86YA3 2104 aa10.01□□□□□ -0.81
USP49-204ENST00000423567 USP9XQ93008 2570 aaPredicted RBP10.01□□□□□ -0.81
USP49-204ENST00000423567 DOPEY2Q9Y3R5 2298 aa10□□□□□ -0.81
USP49-204ENST00000423567 ASH1LQ9NR48 2969 aaKnown RBP10□□□□□ -0.81
USP49-204ENST00000423567 HIVEP3Q5T1R4 2406 aa10□□□□□ -0.81
USP49-204ENST00000423567 C15orf38-AP3S2A0A0A6YYH1 394 aa10□□□□□ -0.81
USP49-204ENST00000423567 SNNO75324 88 aaPredicted RBP10□□□□□ -0.81
USP49-204ENST00000423567 CBR3O75828 277 aa10□□□□□ -0.81
USP49-204ENST00000423567 IL33O95760 270 aa10□□□□□ -0.81
USP49-204ENST00000423567 HPNP05981 417 aa10□□□□□ -0.81
USP49-204ENST00000423567 KRT16P08779 473 aa10□□□□□ -0.81
USP49-204ENST00000423567 ALOX5P09917 674 aa10□□□□□ -0.81
USP49-204ENST00000423567 KITP10721 976 aa10□□□□□ -0.81
USP49-204ENST00000423567 AGAP20933 346 aa10□□□□□ -0.81
USP49-204ENST00000423567 TRPC1P48995 793 aa10□□□□□ -0.81
USP49-204ENST00000423567 CLNS1AP54105 237 aaKnown RBP10□□□□□ -0.81
USP49-204ENST00000423567 DIO3P55073 304 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms