RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 RPS7P62081 194 aaKnown RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 TEKQ02763 1124 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 HYAL2Q12891 473 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 BCL2A1Q16548 175 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 METRNLQ641Q3 311 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 FAM92BQ6ZTR7 304 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 ASB18Q6ZVZ8 466 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 HDDC3Q8N4P3 179 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SLC16A11Q8NCK7 471 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 CHFRQ96EP1 664 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 PRRC1Q96M27 445 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 TOX2Q96NM4 488 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 CAMK1GQ96NX5 476 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 FAIM2Q9BWQ8 316 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 PRSS16Q9NQE7 514 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SNX7Q9UNH6 387 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 DIMT1Q9UNQ2 313 aaKnown RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 LOC102723532A0A0G2JNH3 316 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 OR6C70A6NIJ9 312 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 TIMP1P01033 207 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 KIR2DL3P43628 341 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 PDX1P52945 283 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 CTBP2P56545 445 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SIM1P81133 766 aaPredicted RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 TGM3Q08188 693 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 ARHGEF6Q15052 776 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 FAM27D1Q5T7N8 215 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SLC36A4Q6YBV0 504 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 C19orf18Q8NEA5 215 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 OR52E1Q8NGJ3 308 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 BBS10Q8TAM1 723 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SUN3Q8TAQ9 357 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SPPL3Q8TCT6 385 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 EFHD2Q96C19 240 aaPredicted RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 WACQ9BTA9 647 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 DDX31Q9H8H2 851 aaKnown RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 MARK1Q9P0L2 795 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 CACNA1IQ9P0X4 2223 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 ALPK2Q86TB3 2170 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 A0A0B4J293 547 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 A0A1W2PPK0 400 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 C1QTNF3-AMACRE9PGA6 284 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 MAN2B1O00754 1011 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 CPNE3O75131 537 aaKnown RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 LGI1O95970 557 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 RPN2P04844 631 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 ALPPP05187 535 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 EIF2S1P05198 315 aaKnown RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 LIMS3P0CW19 117 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 LIMS4P0CW20 117 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SLC2A2P11168 524 aaPredicted RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 HIST1H1TP22492 207 aaPredicted RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 DDX6P26196 483 aaKnown RBP eCLIP11.16□□□□□ -0.624e-6■■□□□ 13.2
LIMK1-202ENST00000418310 SLC9A3P48764 834 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 PRDX1Q06830 199 aaKnown RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 IRF4Q15306 451 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 Q8N402 240 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 FAM26EQ8N5C1 309 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 OR4Q3Q8NH05 313 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 NEIL3Q8TAT5 605 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SPRYD4Q8WW59 207 aaPredicted RBP11.16□□□□□ -0.62
LIMK1-202ENST00000418310 RASSF5Q8WWW0 418 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 RNF31Q96EP0 1072 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SAMD8Q96LT4 415 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SLC38A2Q96QD8 506 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 SLC22A4Q9H015 551 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 A0A0A6YYD5 115 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 ARRDC5A6NEK1 342 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 BTN3A3O00478 584 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 TSC22D2O75157 780 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 DNAJB6O75190 326 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 REM1O75628 298 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 UBXN7O94888 489 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 ETV6P41212 452 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 CSTF1Q05048 431 aaKnown RBP11.15□□□□□ -0.62
LIMK1-202ENST00000418310 TMEM201Q5SNT2 666 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 SYCE2Q6PIF2 218 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 TMEM163Q8TC26 289 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 LINC00615Q96LM1 132 aaPredicted RBP11.15□□□□□ -0.62
LIMK1-202ENST00000418310 MCHR1Q99705 422 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 MENTQ9BUN1 341 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 ISG20L2Q9H9L3 353 aaKnown RBP11.15□□□□□ -0.62
LIMK1-202ENST00000418310 PELI2Q9HAT8 420 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 SLC6A20Q9NP91 592 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 DPP7Q9UHL4 492 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 GNB5O14775 395 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 PRODHO43272 600 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 GNRH1P01148 92 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 ASGR2P07307 311 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 AK4P27144 223 aaPredicted RBP11.15□□□□□ -0.62
LIMK1-202ENST00000418310 QPRTQ15274 297 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 OCLNQ16625 522 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 TMEM31Q5JXX7 168 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 ENTPD8Q5MY95 495 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 IDNKQ5T6J7 187 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 FAM111BQ6SJ93 734 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 PLET1Q6UQ28 207 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 VITQ6UXI7 678 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 VASH1Q7L8A9 365 aaPredicted RBP11.15□□□□□ -0.62
LIMK1-202ENST00000418310 ADGRD2Q7Z7M1 963 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms