RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CLEC4FQ8N1N0 589 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 VPS37AQ8NEZ2 397 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 OR4A15Q8NGL6 344 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 OR5AK3PQ8NH89 298 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 FBXO30Q8TB52 745 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 PIK3R3Q92569 461 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 EFHD2Q96C19 240 aaPredicted RBP20.51■□□□□ 0.87
PTCD3-203ENST00000409783 OR52E6Q96RD3 313 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 ADOQ96SZ5 270 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 YIPF4Q9BSR8 244 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 TTTY12Q9BZ98 90 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 TSPAN10Q9H1Z9 355 aaPredicted RBP20.51■□□□□ 0.87
PTCD3-203ENST00000409783 SERHLQ9NQF3 203 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 VPS4AQ9UN37 437 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 POLEQ07864 2286 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 LRRC3CA6NJW4 275 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 ABCB7O75027 752 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 TRIM3O75382 744 aaPredicted RBP20.5■□□□□ 0.87
PTCD3-203ENST00000409783 IGKV1D-16P01601 117 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 IL6P05231 212 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 GNLYP22749 145 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 PRIM2P49643 509 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 ATP4BP51164 291 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 POLR2JP52435 117 aaKnown RBP20.5■□□□□ 0.87
PTCD3-203ENST00000409783 TP53BP2Q13625 1128 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 HYAL4Q2M3T9 481 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 SPDYE7PQ495Y7 208 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 VPS26BQ4G0F5 336 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 TBCELQ5QJ74 424 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 FNDC7Q5VTL7 733 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 ATCAYQ86WG3 371 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 FAM110BQ8TC76 370 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 GPR151Q8TDV0 419 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 SLC9A6Q92581 669 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 OTUB1Q96FW1 271 aaPredicted RBP20.5■□□□□ 0.87
PTCD3-203ENST00000409783 INPP5KQ9BT40 448 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 SERHL2Q9H4I8 314 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 ZNF385DQ9H6B1 395 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 GIN1Q9NXP7 522 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 PCDHGB4Q9UN71 923 aa20.5■□□□□ 0.87
PTCD3-203ENST00000409783 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.5■□□□□ 0.87
PTCD3-203ENST00000409783 GCN1Q92616 2671 aaKnown RBP20.5■□□□□ 0.87
PTCD3-203ENST00000409783 RELNP78509 3460 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 A0A0G2JND7 137 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 FAM234BA2RU67 622 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 ADAM10O14672 748 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 IL33O95760 270 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 VIMP08670 466 aaKnown RBP20.49■□□□□ 0.87
PTCD3-203ENST00000409783 CYP4B1P13584 511 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 CD1EP15812 388 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 SOAT1P35610 550 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 CDKN2CP42773 168 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 RPP38P78345 283 aaKnown RBP20.49■□□□□ 0.87
PTCD3-203ENST00000409783 MRPS22P82650 360 aaKnown RBP20.49■□□□□ 0.87
PTCD3-203ENST00000409783 CDC73Q6P1J9 531 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 C6orf120Q7Z4R8 191 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 GPR137Q96N19 417 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 RILPQ96NA2 401 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 STACQ99469 402 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 DOHHQ9BU89 302 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 ACTRT3Q9BYD9 372 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 PIGUQ9H490 435 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 IL1RL2Q9HB29 575 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 SLC52A3Q9NQ40 469 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 DUSP22Q9NRW4 184 aa20.49■□□□□ 0.87
PTCD3-203ENST00000409783 RNF103-CHMP3A0A140T963 221 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 ANKUB1A6NFN9 424 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 NPIPA5E9PKD4 350 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 HS6ST1O60243 411 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 C1QCP02747 245 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 ALOX5P09917 674 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 UQCRC2P22695 453 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 IL12BP29460 328 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 KRT20P35900 424 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 STX1BP61266 288 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 KCNJ2P63252 427 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 IRX1P78414 480 aaPredicted RBP20.48■□□□□ 0.87
PTCD3-203ENST00000409783 EFR3AQ14156 821 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 DECR1Q16698 335 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 CMPK2Q5EBM0 449 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 TMEM251Q8N6I4 163 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 OR52N2Q8NGI0 321 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 VPS33AQ96AX1 596 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 RMND5BQ96G75 393 aaPredicted RBP20.48■□□□□ 0.87
PTCD3-203ENST00000409783 TMEM120AQ9BXJ8 343 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 ZDHHC11Q9H8X9 412 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 NPIPA1Q9UND3 350 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 KCNE3Q9Y6H6 103 aa20.48■□□□□ 0.87
PTCD3-203ENST00000409783 ZNF407Q9C0G0 2248 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 MYO18BQ8IUG5 2567 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 FREM3P0C091 2139 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 PRAMEF25A6NGN4 478 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 ASNA1O43681 348 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 ICOSLGO75144 302 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 KCNK2O95069 426 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 SNX4O95219 450 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 RFPL3SP0C7P2 107 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 TROVE2P10155 538 aaKnown RBP eCLIP20.47■□□□□ 0.87
PTCD3-203ENST00000409783 PPIAP62937 165 aaKnown RBP20.47■□□□□ 0.87
PTCD3-203ENST00000409783 LRRC74AQ0VAA2 488 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms