RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 CASRP41180 1078 aa12.67□□□□□ -0.38
SNED1-205ENST00000405547 HACD4Q5VWC8 232 aa12.67□□□□□ -0.38
SNED1-205ENST00000405547 ARL14Q8N4G2 192 aa12.67□□□□□ -0.38
SNED1-205ENST00000405547 ATOH8Q96SQ7 321 aa12.67□□□□□ -0.38
SNED1-205ENST00000405547 OR8D2Q9GZM6 311 aa12.67□□□□□ -0.38
SNED1-205ENST00000405547 MMP28Q9H239 520 aa12.67□□□□□ -0.38
SNED1-205ENST00000405547 IFNA2P01563 188 aa12.67□□□□□ -0.38
SNED1-205ENST00000405547 POLR2CP19387 275 aaPredicted RBP12.67□□□□□ -0.38
SNED1-205ENST00000405547 PRDX3P30048 256 aaKnown RBP12.67□□□□□ -0.38
SNED1-205ENST00000405547 SLC18B1Q6NT16 456 aa12.67□□□□□ -0.38
SNED1-205ENST00000405547 KLHDC8AQ8IYD2 350 aa12.67□□□□□ -0.38
SNED1-205ENST00000405547 PRSS56P0CW18 603 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 DRD5P21918 477 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 MLLT11Q13015 90 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 GPM6BQ13491 265 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 TBC1D25Q3MII6 688 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 TMEM225Q6GV28 225 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 WDR53Q7Z5U6 358 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 B3GNT8Q7Z7M8 397 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 SLC7A13Q8TCU3 470 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 MMABQ96EY8 250 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 CLEC4EQ9ULY5 219 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 BACE2Q9Y5Z0 518 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 MUSKO15146 869 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 RAB28P51157 221 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 DHCR24Q15392 516 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 RNASE10Q5GAN6 216 aaKnown RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 LRFN4Q6PJG9 635 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 PBDC1Q9BVG4 233 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 OR51J1Q9H342 316 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 PCDHA9Q9Y5H5 950 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 ACOT7O00154 380 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 ARF3P61204 181 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 ARF1P84077 181 aaKnown RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 METAP1DQ6UB28 335 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 NRMQ8IXM6 262 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 SLC7A5P1Q8MH63 180 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 OR5M3Q8NGP4 307 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 THAP7Q9BT49 309 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 C20orf27Q9GZN8 174 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 TEX10Q9NXF1 929 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 SCN3AQ9NY46 2000 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 DDCP20711 480 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 ZNF140P52738 457 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 VSX2P58304 361 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 PRPS1P60891 318 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 RAD51DO75771 328 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 CD3GP09693 182 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 ZNF791Q3KP31 576 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 ZNF551Q7Z340 670 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 MEN1O00255 615 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 PLGP00747 810 aaPredicted RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 ADORA3P0DMS8 318 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 GDI2P50395 445 aaKnown RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 ZSCAN1Q8NBB4 408 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 ZDHHC12Q96GR4 267 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 CAPNS2Q96L46 248 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 MS4A4EQ96PG1 132 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 SRA1Q9HD15 236 aaKnown RBP12.66□□□□□ -0.38
SNED1-205ENST00000405547 OR2S2Q9NQN1 319 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 NPAP1Q9NZP6 1156 aa12.66□□□□□ -0.38
SNED1-205ENST00000405547 AP1G1O43747 822 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 TYRP1P17643 537 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 CDK2P24941 298 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 PRSS3P35030 304 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 MRPS10P82664 201 aaKnown RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 PIN1Q13526 163 aaPredicted RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 CCINQ13939 588 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 TATDN3Q17R31 274 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 OR6C4Q8NGE1 309 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 WDR20Q8TBZ3 569 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 PDLIM5Q96HC4 596 aaKnown RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 GPR62Q9BZJ7 368 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 OTOFQ9HC10 1997 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 S100PP25815 95 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 RPS5P46782 204 aaKnown RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 GTDC1Q4AE62 458 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 GTPBP8Q8N3Z3 284 aaPredicted RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 EDARQ9UNE0 448 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 ZNF860A6NHJ4 632 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 MECP2P51608 486 aaKnown RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 WDR5P61964 334 aaKnown RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 APCDD1Q8J025 514 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 OR5AK2Q8NH90 309 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 ZDHHC1Q8WTX9 485 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 SLC2A4RGQ9NR83 387 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 OLAHQ9NV23 265 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 SPCS2Q15005 226 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 GPR19Q15760 415 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 SHFQ7M4L6 423 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 TMEM156Q8N614 296 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 VRK1Q99986 396 aaPredicted RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 RREB1Q92766 1687 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 A0A1W2PPL8 197 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 RTCAO00442 366 aaKnown RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 CD34P28906 385 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 C21orf33P30042 268 aaPredicted RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 FPGSQ05932 587 aa12.65□□□□□ -0.38
SNED1-205ENST00000405547 EIF2S3LQ2VIR3 472 aaKnown RBP12.65□□□□□ -0.38
SNED1-205ENST00000405547 PIANPQ8IYJ0 282 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms