RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 KIF26AQ9ULI4 1882 aaPredicted RBP19.69■□□□□ 0.74
CTCF-202ENST00000401394 A0A1W2PRQ8 180 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 A8MUA0 341 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 FCMRO60667 390 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 NCBP2P52298 156 aaKnown RBP eCLIP19.69■□□□□ 0.747e-8■□□□□ 9.4
CTCF-202ENST00000401394 POU4F3Q15319 338 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 EOGTQ5NDL2 527 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 MPP7Q5T2T1 576 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 ZDHHC20Q5W0Z9 365 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 SLC27A4Q6P1M0 643 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 TMEM107Q6UX40 140 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 ZNF793Q6ZN11 406 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 OR13C5Q8NGS8 318 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 ZNF607Q96SK3 696 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 C1QTNF6Q9BXI9 259 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 CHST2Q9Y4C5 530 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 LOC105371267A0A1B0GV96 52 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 NARSO43776 548 aaKnown RBP19.69■□□□□ 0.74
CTCF-202ENST00000401394 TOXO94900 526 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 MMP12P39900 470 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 SMSP52788 366 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 TAS2R41P59536 307 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 ANKRD54Q6NXT1 300 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 C1orf94Q6P1W5 598 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 OR8H3Q8N146 312 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 C9orf62Q8N4C0 152 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 OR11H7Q8NGC8 314 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 TEX47Q8TBZ9 253 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 ZNF689Q96CS4 500 aaPredicted RBP19.69■□□□□ 0.74
CTCF-202ENST00000401394 SLC35G5Q96KT7 338 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 ZNF649Q9BS31 505 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 DPH7Q9BTV6 452 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 SYNPO2LQ9H987 977 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 NUDT15Q9NV35 164 aa19.69■□□□□ 0.74
CTCF-202ENST00000401394 ARHGEF9O43307 516 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 MRPL3P09001 348 aaKnown RBP19.68■□□□□ 0.74
CTCF-202ENST00000401394 GPR1P46091 355 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 DEFB103AP81534 67 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 GPR135Q8IZ08 494 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 SLC43A3Q8NBI5 491 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 MARVELD1Q9BSK0 173 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 TMEM245Q9H330 911 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 ING3Q9NXR8 418 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 IL36AQ9UHA7 158 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 ICKQ9UPZ9 632 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 SPTBN5Q9NRC6 3674 aaKnown RBP19.68■□□□□ 0.74
CTCF-202ENST00000401394 DENND4CQ5VZ89 1909 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 CDC42EP2O14613 210 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 PI15O43692 258 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 THY1P04216 161 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 PPP3R1P63098 170 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 TNK1Q13470 666 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 TEAD2Q15562 447 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 KLHL22Q53GT1 634 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 TCEAL5Q5H9L2 206 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 NDUFAF5Q5TEU4 345 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 TRILQ7L0X0 811 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 ABHD1Q96SE0 405 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 MKRN2Q9H000 416 aaKnown RBP19.68■□□□□ 0.74
CTCF-202ENST00000401394 DKK3Q9UBP4 350 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 NOS1APO75052 506 aaPredicted RBP19.68■□□□□ 0.74
CTCF-202ENST00000401394 REM1O75628 298 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 UBXN7O94888 489 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 CD3GP09693 182 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 SRP54P61011 504 aaKnown RBP19.68■□□□□ 0.74
CTCF-202ENST00000401394 SLC7A9P82251 487 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 SLC36A4Q6YBV0 504 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 SAMD12Q8N8I0 201 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 DUSP18Q8NEJ0 188 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 CD99L2Q8TCZ2 262 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 TMEM255BQ8WV15 326 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 GCDHQ92947 438 aaPredicted RBP19.68■□□□□ 0.74
CTCF-202ENST00000401394 WDR34Q96EX3 536 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 ZSWIM3Q96MP5 696 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 LGR4Q9BXB1 951 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 MRPL15Q9P015 296 aaKnown RBP19.68■□□□□ 0.74
CTCF-202ENST00000401394 KLHL21Q9UJP4 597 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 MGAT4AQ9UM21 535 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 LIPT1Q9Y234 373 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 IRAK3Q9Y616 596 aa19.68■□□□□ 0.74
CTCF-202ENST00000401394 C18orf63Q68DL7 685 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 CPOQ8IVL8 374 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 NRMQ8IXM6 262 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 TRIM63Q969Q1 353 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 KCNJ15Q99712 375 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 ORAI3Q9BRQ5 295 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 MS4A8Q9BY19 250 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 ABCG5Q9H222 651 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 IMP3Q9NV31 184 aaKnown RBP19.67■□□□□ 0.74
CTCF-202ENST00000401394 PTGFRNQ9P2B2 879 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 P2RX2Q9UBL9 471 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 SPTBP11277 2137 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 CENPVL1A0A0U1RR11 272 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 STK25O00506 426 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 C8AP07357 584 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 CCR6P51684 374 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 RAB40BQ12829 278 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 TOR2AQ5JU69 321 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 IZUMO1Q8IYV9 350 aa19.67■□□□□ 0.74
CTCF-202ENST00000401394 OR8K5Q8NH50 307 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms