RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 C3orf38Q5JPI3 329 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 TPRG1LQ5T0D9 272 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 ZCCHC12Q6PEW1 402 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 RNF44Q7L0R7 432 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 ZER1Q7Z7L7 766 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 RANBP3LQ86VV4 465 aaPredicted RBP6.74□□□□□ -1.33
SMAD1-202ENST00000394092 OR2L13Q8N349 312 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 OR10G6Q8NH81 332 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 RPLP0P6Q8NHW5 317 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 FLVCR1-AS1Q8TAF5 88 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 FAM174AQ8TBP5 190 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 TMEM163Q8TC26 289 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 ACOT11Q8WXI4 607 aaPredicted RBP6.74□□□□□ -1.33
SMAD1-202ENST00000394092 KAT2AQ92830 837 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 PMM1Q92871 262 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 OSTF1Q92882 214 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 RFKQ969G6 155 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 C16orf58Q96GQ5 468 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 BMFQ96LC9 184 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 OR51E2Q9H255 320 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 MTHFD2LQ9H903 347 aaPredicted RBP6.74□□□□□ -1.33
SMAD1-202ENST00000394092 MED17Q9NVC6 651 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 NDUFB11Q9NX14 153 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 CLDND1Q9NY35 253 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 KLHL3Q9UH77 587 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 FBXL21Q9UKT6 434 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 MMP17Q9ULZ9 603 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 STUB1Q9UNE7 303 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 SATB2Q9UPW6 733 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 ZNF443Q9Y2A4 671 aaPredicted RBP6.74□□□□□ -1.33
SMAD1-202ENST00000394092 LSM2Q9Y333 95 aaKnown RBP6.74□□□□□ -1.33
SMAD1-202ENST00000394092 EXOSC1Q9Y3B2 195 aaKnown RBP6.74□□□□□ -1.33
SMAD1-202ENST00000394092 WDR45Q9Y484 360 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 SLC22A7Q9Y694 548 aa6.74□□□□□ -1.33
SMAD1-202ENST00000394092 LAMA3Q16787 3333 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 A0A075B6Q4 140 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 A0A087WUU8 490 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 CPSF4LA6NMK7 179 aaKnown RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 H0Y8X5 98 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 TLX2O43763 284 aaPredicted RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 KIAA0513O60268 411 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 TPST2O60704 377 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 UPK1BO75841 260 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 ATP1B1P05026 303 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 DBIP07108 87 aaKnown RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 ACP2P11117 423 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 GLULP15104 373 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 POLR2CP19387 275 aaPredicted RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 FPR3P25089 353 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 ETV6P41212 452 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 STAT5AP42229 794 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 AVPR1BP47901 424 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 CCR5P51681 352 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 LIMK1P53667 647 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 SKP1P63208 163 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 DUSP8Q13202 625 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 LTB4RQ15722 352 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 MINDY4Q4G0A6 757 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 DEFB134Q4QY38 66 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 SYT14P1Q58G82 188 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 SPANXN2Q5MJ10 180 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 PERM1Q5SV97 790 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 FCRL6Q6DN72 434 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 ARMC6Q6NXE6 501 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 FBXO42Q6P3S6 717 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 FAM111BQ6SJ93 734 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 FRRS1Q6ZNA5 592 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 PLEKHG7Q6ZR37 379 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 ABI3BPQ7Z7G0 1075 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 MRGPREQ86SM8 312 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 TRIM73Q86UV7 250 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 COMTD1Q86VU5 262 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 VRK2Q86Y07 508 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 ZNF619Q8N2I2 560 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 CLDN22Q8N7P3 220 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 NANOGP1Q8N7R0 232 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 DNAJC5GQ8N7S2 189 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 CDRT4Q8N9R6 151 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 AVL9Q8NBF6 648 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 OR7G2Q8NG99 324 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 BAHD1Q8TBE0 780 aaPredicted RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 GPBAR1Q8TDU6 330 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 SNRNP27Q8WVK2 155 aaKnown RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 SLC9A6Q92581 669 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 DIO2Q92813 273 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 CDS1Q92903 461 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 WNT2BQ93097 391 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 COL26A1Q96A83 441 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 SLC35A4Q96G79 324 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 LRR1Q96L50 414 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 CEP19Q96LK0 163 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 ZNF582Q96NG8 517 aaPredicted RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 OPALINQ96PE5 141 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 OR5M11Q96RB7 305 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 STACQ99469 402 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 MCHR1Q99705 422 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 WFDC6Q9BQY6 131 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 CENPOQ9BU64 300 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 RSPO3Q9BXY4 272 aaPredicted RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 NUAK2Q9H093 628 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms