RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ACP5P13686 325 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 DRD2P14416 443 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 CPN2P22792 545 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 OMPP47874 163 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 DBPQ10586 325 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-202ENST00000376839 ZNF311Q5JNZ3 666 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 VASNQ6EMK4 673 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 CACUL1Q86Y37 369 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 NKAIN4Q8IVV8 208 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 POGLUT1Q8NBL1 392 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 WFIKKN2Q8TEU8 576 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 UPRTQ96BW1 309 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 RSPRY1Q96DX4 576 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 RNF32Q9H0A6 362 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 SLC38A1Q9H2H9 487 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 NT5DC2Q9H857 520 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 RBFOX1Q9NWB1 397 aaKnown RBP12.4□□□□□ -0.42
ACTN1-202ENST00000376839 CARNS1A5YM72 827 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 GABRPO00591 440 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 GNRH1P01148 92 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 HLA-DMAP28067 261 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 BCL6P41182 706 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 GPR4P46093 362 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 TMEM52BQ4KMG9 183 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 AADACL4Q5VUY2 407 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 C18orf63Q68DL7 685 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 SYCE2Q6PIF2 218 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 B3GLCTQ6Y288 498 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 RASSF6Q6ZTQ3 369 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 NEIL3Q8TAT5 605 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 CXorf40AQ8TE69 158 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 PCBD2Q9H0N5 130 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 ACOXLQ9NUZ1 547 aa12.4□□□□□ -0.42
ACTN1-202ENST00000376839 A0A0G2JPF8 293 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 OTOL1A6NHN0 477 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 HNRNPCL2B2RXH8 293 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 HNRNPCL3B7ZW38 293 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 SURF4O15260 269 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 ERI3O43414 337 aaKnown RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 CPNE3O75131 537 aaKnown RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 CLEC3AO75596 197 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 ZIC2O95409 532 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 HNRNPCL4P0DMR1 293 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 EVX1P49640 407 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 CTBP2P56545 445 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 TRA2BP62995 288 aaKnown RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 CDK3Q00526 305 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 ELAVL3Q14576 367 aaKnown RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 TRAM2Q15035 370 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 MLF2Q15773 248 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 TMEM64Q6YI46 380 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 SPRYD4Q8WW59 207 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 TOX2Q96NM4 488 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 OR7D2Q96RA2 312 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 FAIM2Q9BWQ8 316 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 RPRD1BQ9NQG5 326 aaKnown RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 ASB4Q9Y574 426 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 DOCK9Q9BZ29 2069 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 LOC102723532A0A0G2JNH3 316 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 EDDM13A0A1B0GTR0 161 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 ERVH48-1M5A8F1 160 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 LYRM1O43325 122 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 NDUFB5O43674 189 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 PIP5K1CO60331 668 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 AIFM1O95831 613 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 THY1P04216 161 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 RPN2P04844 631 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 SLC35G4P0C7Q5 338 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 P2RY2P41231 377 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 TCTE3Q8IZS6 198 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 OR2A1Q8NGT9 310 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 ZNF296Q8WUU4 475 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 FERD3LQ96RJ6 166 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 ARHGDIGQ99819 225 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 TMEM43Q9BTV4 400 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 RNF208Q9H0X6 261 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 C11orf49Q9H6J7 331 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 SYNPO2LQ9H987 977 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 CSNK1G3Q9Y6M4 447 aa12.39□□□□□ -0.43
ACTN1-202ENST00000376839 SNRNP200O75643 2136 aaKnown RBP12.39□□□□□ -0.43
ACTN1-202ENST00000376839 FAM240BA0A1B0GVZ2 78 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 SMLR1H3BR10 107 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 SOCS6O14544 535 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 ALX3O95076 343 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 FGF19O95750 216 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 EPCAMP16422 314 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 HSD17B2P37059 387 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 VIPR2P41587 438 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 MC3RP41968 323 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 PRDX1Q06830 199 aaKnown RBP12.38□□□□□ -0.43
ACTN1-202ENST00000376839 FAPQ12884 760 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 FZD5Q13467 585 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 SLC9A5Q14940 896 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 EOGTQ5NDL2 527 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 ADAMTSL4Q6UY14 1074 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 ETFBKMTQ8IXQ9 262 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 CADM2Q8N3J6 435 aa12.38□□□□□ -0.43
ACTN1-202ENST00000376839 JPH3Q8WXH2 748 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-202ENST00000376839 ZC3HAV1LQ96H79 300 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms