RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CDS1Q92903 461 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 SMIM10Q96HG1 83 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 NUAK2Q9H093 628 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 SAP130Q9H0E3 1048 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 CNIH4Q9P003 139 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 SEC14L4Q9UDX3 406 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 OR6C74A6NCV1 312 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 AGR2O95994 175 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 RGS8P57771 180 aaPredicted RBP27.08■■□□□ 1.93
SSBP3-204ENST00000371320 HOXC5Q00444 222 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 SFSWAPQ12872 951 aaKnown RBP27.08■■□□□ 1.93
SSBP3-204ENST00000371320 HTR4Q13639 388 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 FCRL6Q6DN72 434 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 GDPGP1Q6ZNW5 385 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 FGF11Q92914 225 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 KLHL25Q9H0H3 589 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 ANKRD19PQ9H560 264 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 QPCTLQ9NXS2 382 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 ACTR10Q9NZ32 417 aa27.08■■□□□ 1.93
SSBP3-204ENST00000371320 TESQ9UGI8 421 aaKnown RBP27.08■■□□□ 1.93
SSBP3-204ENST00000371320 SCN3AQ9NY46 2000 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 AP3D1O14617 1153 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 MED26O95402 600 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 MLLT11Q13015 90 aaPredicted RBP27.07■■□□□ 1.92
SSBP3-204ENST00000371320 TMEM31Q5JXX7 168 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 FRRS1Q6ZNA5 592 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 TRIM48Q8IWZ4 208 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 PIGXQ8TBF5 258 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 TMEM163Q8TC26 289 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 FAM46AQ96IP4 442 aaKnown RBP27.07■■□□□ 1.92
SSBP3-204ENST00000371320 ASPNQ9BXN1 380 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 DAPP1Q9UN19 280 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 MLLT1Q03111 559 aaPredicted RBP27.07■■□□□ 1.92
SSBP3-204ENST00000371320 GPR18Q14330 331 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 ALG11Q2TAA5 492 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 KLHL22Q53GT1 634 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 PLEKHM3Q6ZWE6 761 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 OR2L13Q8N349 312 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 OR9Q1Q8NGQ5 310 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 MTHFD2LQ9H903 347 aaPredicted RBP27.07■■□□□ 1.92
SSBP3-204ENST00000371320 CACYBPQ9HB71 228 aaKnown RBP27.07■■□□□ 1.92
SSBP3-204ENST00000371320 NDUFB11Q9NX14 153 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 UGT2A1Q9Y4X1 527 aa27.07■■□□□ 1.92
SSBP3-204ENST00000371320 DNAJB6O75190 326 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 UBXN7O94888 489 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 NTN1O95631 604 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 NDUFV2P19404 249 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 MAP4K2Q12851 820 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 SLC36A4Q6YBV0 504 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 RASSF6Q6ZTQ3 369 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 CAMKVQ8NCB2 501 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 KCNS3Q9BQ31 491 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 ZNF229Q9UJW7 825 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 STUB1Q9UNE7 303 aa27.06■■□□□ 1.92
SSBP3-204ENST00000371320 ZNF443Q9Y2A4 671 aaPredicted RBP27.06■■□□□ 1.92
SSBP3-204ENST00000371320 ZNF10P21506 573 aaPredicted RBP27.05■■□□□ 1.92
SSBP3-204ENST00000371320 CRYBB2P43320 205 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 OMPP47874 163 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 TPMTP51580 245 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 PUS10Q3MIT2 529 aaKnown RBP27.05■■□□□ 1.92
SSBP3-204ENST00000371320 STEAP3Q658P3 488 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 ABHD13Q7L211 337 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 C11orf74Q86VG3 221 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 SIMC1Q8NDZ2 872 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 OR8D4Q8NGM9 314 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 SLC38A2Q96QD8 506 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 MCHR1Q99705 422 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 ZNF232Q9UNY5 417 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 NTNG1Q9Y2I2 539 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 WDR45Q9Y484 360 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 PIAS3Q9Y6X2 628 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 LOC105369274A0A096LPK9 316 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 LOC102723532A0A0G2JNH3 316 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.05■■□□□ 1.92
SSBP3-204ENST00000371320 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.05■■□□□ 1.92
SSBP3-204ENST00000371320 LRRC72A6NJI9 287 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 SNTNA6NMZ2 147 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 DRD1P21728 446 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 ETV5P41161 510 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 ETV1P50549 477 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 MRPS21P82921 87 aaKnown RBP27.05■■□□□ 1.92
SSBP3-204ENST00000371320 AGAP7PQ5VUJ5 663 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 MRGPREQ86SM8 312 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 PEX5LQ8IYB4 626 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 OR4N4Q8N0Y3 316 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 TWSG1Q9GZX9 223 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 PTGFRNQ9P2B2 879 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 KLHL3Q9UH77 587 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 PILRAQ9UKJ1 303 aa27.05■■□□□ 1.92
SSBP3-204ENST00000371320 PNMA8CA0A1B0GUJ8 204 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 WWP2O00308 870 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 PRODHO43272 600 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 MYL12AP19105 171 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 SEPHS1P49903 392 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 TFF2Q03403 129 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 DECR1Q16698 335 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 SPANXN2Q5MJ10 180 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 LIPKQ5VXJ0 399 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 USP53Q70EK8 1073 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 NKAIN4Q8IVV8 208 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms