RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ACVR2AP27037 513 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 TDGF1P3P51864 188 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 GP2P55259 537 aaKnown RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 RPS15AP62244 130 aaKnown RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 CSNK1G2P78368 415 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 CD47Q08722 323 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 SP140Q13342 867 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 PWP1Q13610 501 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 ELOAQ14241 798 aaKnown RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 NDUFA9Q16795 377 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 ZXDCQ2QGD7 858 aaPredicted RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 PAGE2BQ5JRK9 111 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 OTUD3Q5T2D3 398 aaPredicted RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 SULT1C3Q6IMI6 304 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 TMEM214Q6NUQ4 689 aaKnown RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 LINC00696Q6ZRV3 163 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 PTGR2Q8N8N7 351 aaPredicted RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 LILRB4Q8NHJ6 448 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 STAG3L4Q8TBR4 150 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 BRIX1Q8TDN6 353 aaKnown RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 ZFP90Q8TF47 636 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 EEF1AKMT1Q8WVE0 214 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 C3orf30Q96M34 536 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 SEPHS2Q99611 448 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 APOL4Q9BPW4 351 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 SGPP1Q9BX95 441 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 GABARAPL1Q9H0R8 117 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 ALG9Q9H6U8 611 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 CCDC177Q9NQR7 707 aaPredicted RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 EIF3LQ9Y262 564 aaKnown RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 TRAV17A0A0B4J275 112 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 GNGT2O14610 69 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 FFAR3O14843 346 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 GPR42O15529 346 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 MAN1A2O60476 641 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 KERAO60938 352 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 TSPAN12O95859 305 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 STSP08842 583 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 PRIM2P49643 509 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 ISL1P61371 349 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 TBPL1P62380 186 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 PRKCDQ05655 676 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 TSTA3Q13630 321 aaPredicted RBP13.9□□□□□ -0.18
LMO4-201ENST00000370542 SYT16Q17RD7 645 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 XKR7Q5GH72 579 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 RBM20Q5T481 1227 aaKnown RBP13.9□□□□□ -0.18
LMO4-201ENST00000370542 H3F3CQ6NXT2 135 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 IFNEQ86WN2 208 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 BCORP1Q8N888 145 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 OR4K1Q8NGD4 311 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 MCOLN3Q8TDD5 553 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 ZNF300Q96RE9 604 aaPredicted RBP13.9□□□□□ -0.18
LMO4-201ENST00000370542 MBOAT4Q96T53 435 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 ZBTB18Q99592 522 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 DGCR6LQ9BY27 220 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 VN1R1Q9GZP7 353 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 DSN1Q9H410 356 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 DUSP21Q9H596 190 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 TNFRSF12AQ9NP84 129 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 TAS2R13Q9NYV9 303 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 GRIP1Q9Y3R0 1128 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 ABCA2Q9BZC7 2435 aa13.9□□□□□ -0.18
LMO4-201ENST00000370542 ATP6AP2A0A1C7CYW4 349 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 LOC110117498-PIK3R3F6TDL0 507 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 LCMT2O60294 686 aaKnown RBP13.89□□□□□ -0.19
LMO4-201ENST00000370542 ATP6AP2O75787 350 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 TRAPPC2P0DI81 140 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 TRAPPC2BP0DI82 140 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 NPPBP16860 134 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 BCL6P41182 706 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 AVPR1BP47901 424 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 ARHGDIAP52565 204 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 CLCQ05315 142 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 EEF1A2Q05639 463 aaKnown RBP13.89□□□□□ -0.19
LMO4-201ENST00000370542 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.89□□□□□ -0.19
LMO4-201ENST00000370542 MAD2L1Q13257 205 aaPredicted RBP13.89□□□□□ -0.19
LMO4-201ENST00000370542 ZIK1Q3SY52 487 aaPredicted RBP13.89□□□□□ -0.19
LMO4-201ENST00000370542 TIGD2Q4W5G0 525 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 ZNF544Q6NX49 715 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 AGTRAPQ6RW13 159 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 TBPL2Q6SJ96 375 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 PAQR3Q6TCH7 311 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 LCTLQ6UWM7 567 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 SPATA6LQ8N4H0 392 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 AMER2Q8N7J2 671 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 OR1N1Q8NGS0 311 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 OR9A4Q8NGU2 314 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 MCFD2Q8NI22 146 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 FAM110BQ8TC76 370 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 PIK3R3Q92569 461 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 MARVELD3Q96A59 401 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 KIAA1191Q96A73 305 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 TAAR6Q96RI8 345 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 NDEL1Q9GZM8 345 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 CCDC59Q9P031 241 aaKnown RBP13.89□□□□□ -0.19
LMO4-201ENST00000370542 PTGFRNQ9P2B2 879 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 TRMT6Q9UJA5 497 aaKnown RBP13.89□□□□□ -0.19
LMO4-201ENST00000370542 OSGIN1Q9UJX0 560 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 MKL2Q9ULH7 1088 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 SH2B3Q9UQQ2 575 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms