RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 BNC1Q01954 994 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 MLLT1Q03111 559 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 POU4F2Q12837 409 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 TRAM1Q15629 374 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 SYPL1Q16563 259 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 DEFB110Q30KQ9 67 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM164Q5U3C3 297 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 BICRALQ6AI39 1079 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 FRMPD2BQ6IN97 320 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 ARHGAP11AQ6P4F7 1023 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 GPALPP1Q8IXQ4 340 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 SPARTQ8N0X7 666 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 TBC1D15Q8TC07 691 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 SUN5Q8TC36 379 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 RLN3Q8WXF3 142 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 THRSPQ92748 146 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 SLCO4A1Q96BD0 722 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 MS4A6EQ96DS6 147 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 LGALS12Q96DT0 336 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 DUSP23Q9BVJ7 150 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 SEMA6CQ9H3T2 930 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 GLIPR2Q9H4G4 154 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 LYRM4Q9HD34 91 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 C1GALT1Q9NS00 363 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 ABI3Q9P2A4 366 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 TBC1D29Q9UFV1 150 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC23A2Q9UGH3 650 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 RARRES3Q9UL19 164 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 MRPS7Q9Y2R9 242 aaKnown RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 MAGED1Q9Y5V3 778 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 PDCD11Q14690 1871 aaKnown RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 KCNE1BA0A087WTH5 132 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 A0A0A6YYC8 382 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 TCRBV5S2A0A599 114 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 POM121BA6NF01 834 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 I3L1I5 382 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 WWP2O00308 870 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 LINC01565O15544 149 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 AQP9O43315 295 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 CD2P06729 351 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 HOXC4P09017 264 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 GIMD1P0DJR0 217 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 OR2B6P58173 313 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 MXD1Q05195 221 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 HYAL2Q12891 473 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 KIAA0040Q15053 153 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 C6orf132Q5T0Z8 1188 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 GARNL3Q5VVW2 1013 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 KLHL24Q6TFL4 600 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 GDPGP1Q6ZNW5 385 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 CLIP4Q8N3C7 705 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 METTL27Q8N6F8 245 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 C19orf47Q8N9M1 422 aaKnown RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 OR13H1Q8NG92 308 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 OR5L2Q8NGL0 311 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 DNAJA4Q8WW22 397 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 PIGKQ92643 395 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 SGTBQ96EQ0 304 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 CNDP2Q96KP4 475 aaKnown RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF578Q96N58 590 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 SPRTNQ9H040 489 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC6A17Q9H1V8 727 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 TRPV5Q9NQA5 729 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 ERVK-11Q9UQG0 969 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 CARD8Q9Y2G2 431 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 NPIPB8E9PQR5 432 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 SGK494L7N484 410 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 ENTPD6O75354 484 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 BCAS1O75363 584 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 LDOC1O95751 146 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 FUCA1P04066 466 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 PVRP15151 417 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 PGCP20142 388 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 RCVRNP35243 200 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 TRIM23P36406 574 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 MTNR1AP48039 350 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 ADARB1P78563 741 aaKnown RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 PLCXD2Q0VAA5 305 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 GAB1Q13480 694 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 IL18Q14116 193 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 LRIT3Q3SXY7 679 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 ALG10BQ5I7T1 473 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 DCST2Q5T1A1 773 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 PTCRAQ6ISU1 281 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 PLET1Q6UQ28 207 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 USP53Q70EK8 1073 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 NRMQ8IXM6 262 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 SDR16C5Q8N3Y7 309 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 PROKR2Q8NFJ6 384 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 CHPT1Q8WUD6 406 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 PMM1Q92871 262 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 EFHD2Q96C19 240 aaPredicted RBP5□□□□□ -1.61
SMNDC1-202ENST00000369603 COX14Q96I36 57 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 S100A13Q99584 98 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 ICKQ9UPZ9 632 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 SDK1Q7Z5N4 2213 aa5□□□□□ -1.61
SMNDC1-202ENST00000369603 GXYLT2A0PJZ3 443 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 FABP12A6NFH5 140 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF879B4DU55 563 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF670-ZNF695F2Z2N8 137 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms