RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PDP1Q9P0J1 537 aaPredicted RBP12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF229Q9UJW7 825 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 ENTPD4Q9Y227 616 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 DMXL1Q9Y485 3027 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 IGHV1OR21-1A0A087WYE8 117 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 PGRMC2O15173 223 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 GDF9O60383 454 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 B4GALT2O60909 372 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 OPN1SWP03999 348 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 CSNK2A2P19784 350 aaPredicted RBP12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 RYKP34925 604 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 P2RX3P56373 397 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 DAB2P98082 770 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 SYT16Q17RD7 645 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 MANEAQ5SRI9 462 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 AHSA2Q719I0 299 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 TSEN54Q7Z6J9 526 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 FAM181AQ8N9Y4 354 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 KCT2Q8NC54 265 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 OR6Q1Q8NGQ2 317 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 SLC38A5Q8WUX1 472 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 HTRA1Q92743 480 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 YIPF6Q96EC8 236 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 AHCYL2Q96HN2 611 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 TGM7Q96PF1 710 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF300Q96RE9 604 aaPredicted RBP12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 BTBD2Q9BX70 525 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 ABCB10Q9NRK6 738 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 SATB2Q9UPW6 733 aa12.99□□□□□ -0.33
CSNK1E-201ENST00000359867 HMGN4O00479 90 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 SLC22A1O15245 554 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 CCDC159P0C7I6 412 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF10P21506 573 aaPredicted RBP12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 MPIP34949 423 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 SLC35A2P78381 396 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 CFHR1Q03591 330 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 FAHD1Q6P587 224 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 TNFAIP8L2Q6P589 184 aaPredicted RBP12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 Q6ZPB1 254 aaPredicted RBP12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 DYNC2LI1Q8TCX1 351 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 SLC35G5Q96KT7 338 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 SERINC2Q96SA4 455 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 ZFYVE21Q9BQ24 234 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 PHF11Q9UIL8 331 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 POMT2Q9UKY4 750 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 MDC1Q14676 2089 aaKnown RBP12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF292O60281 2723 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 CENPBD1B2RD01 187 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 TAF4O00268 1085 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 CTSVO60911 334 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 ERAL1O75616 437 aaKnown RBP12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF888P0CJ79 500 aaPredicted RBP12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 RRM2P31350 389 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 CSF2RBP32927 897 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 GRK6P43250 576 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 SEPHS1P49903 392 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 TP53BP2Q13625 1128 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 C18orf63Q68DL7 685 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 BAHD1Q8TBE0 780 aaPredicted RBP12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 RHBDD1Q8TEB9 315 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 RASSF5Q8WWW0 418 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 S100ZQ8WXG8 99 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 CNRIP1Q96F85 164 aaPredicted RBP12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 VMP1Q96GC9 406 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 MAP3K3Q99759 626 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 SYNDIG1Q9H7V2 258 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 FKBP14Q9NWM8 211 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 HSPE1-MOB4S4R3N1 261 aa12.98□□□□□ -0.33
CSNK1E-201ENST00000359867 A0A0J9YY10 115 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 MTRF1O75570 445 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 DNAJB5O75953 348 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 BCHEP06276 602 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF883P0CG24 379 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 ST6GAL1P15907 406 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 KRT20P35900 424 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 BUD31P41223 144 aaPredicted RBP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 RPS26P62854 115 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 PROX2Q3B8N5 592 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 PLEKHG7Q6ZR37 379 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 SAMD14Q8IZD0 417 aaPredicted RBP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF655Q8N720 491 aaPredicted RBP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 TTC29Q8NA56 475 aaPredicted RBP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 SETD9Q8NE22 299 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 OR56A1Q8NGH5 318 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 SUN3Q8TAQ9 357 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 TMEM19Q96HH6 336 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 DACH2Q96NX9 599 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 MAPKAP1Q9BPZ7 522 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 CCDC3Q9BQI4 270 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 AMBNQ9NP70 447 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 TMEM9BQ9NQ34 198 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 ZCCHC3Q9NUD5 404 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 P2RX2Q9UBL9 471 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 ATXN7L1Q9ULK2 861 aaPredicted RBP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 TPRKBQ9Y3C4 175 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF780BQ9Y6R6 833 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 GLOD5A6NK44 160 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 C4orf47A7E2U8 309 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 A8MVJ9 347 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 TNFRSF11BO00300 401 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms