RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 VNN3Q9NY84 501 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 F5H0A9 414 aaPredicted RBP12.98□□□□□ -0.33
VCP-201ENST00000358901 ZNF208O43345 1280 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 FAM189A2Q15884 450 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 FCRLBQ6BAA4 426 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 CCSAPQ6IQ19 270 aaPredicted RBP12.98□□□□□ -0.33
VCP-201ENST00000358901 HMBOX1Q6NT76 420 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 OR9A2Q8NGT5 310 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 ALG8Q9BVK2 526 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.98□□□□□ -0.33
VCP-201ENST00000358901 OR10A4Q9H209 315 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 RXFP3Q9NSD7 469 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 A0A1B0GVC2 190 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 A6NIN4 97 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 AK1P00568 194 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 MAS1P04201 325 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 HLA-FP30511 346 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 SUOXP51687 545 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 TCEAL6Q6IPX3 200 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 ANKRD54Q6NXT1 300 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 FIGLAQ6QHK4 219 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 TTLL10Q6ZVT0 673 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 ZNF296Q8WUU4 475 aaPredicted RBP12.98□□□□□ -0.33
VCP-201ENST00000358901 ZC3H10Q96K80 434 aaKnown RBP12.98□□□□□ -0.33
VCP-201ENST00000358901 MYNNQ9NPC7 610 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 IL37Q9NZH6 218 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 SERTAD3Q9UJW9 196 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 UCHL1P09936 223 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 MTHFD2P13995 350 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 IGFBP6P24592 240 aaPredicted RBP12.98□□□□□ -0.33
VCP-201ENST00000358901 GRK5P34947 590 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 FRKP42685 505 aaPredicted RBP12.98□□□□□ -0.33
VCP-201ENST00000358901 DAPP51397 102 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 POU4F2Q12837 409 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 RUNX3Q13761 415 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 SLC14A2Q15849 920 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 SYPL1Q16563 259 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 TRMT10AQ8TBZ6 339 aaKnown RBP12.98□□□□□ -0.33
VCP-201ENST00000358901 ADAMTS19Q8TE59 1207 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 DEDD2Q8WXF8 326 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 MUL1Q969V5 352 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 CLCC1Q96S66 551 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 SAP130Q9H0E3 1048 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 EPHA6Q9UF33 1036 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 B3GNT3Q9Y2A9 372 aa12.98□□□□□ -0.33
VCP-201ENST00000358901 CROCCQ5TZA2 2017 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 LOC105369274A0A096LPK9 316 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 FAM183AA6NL82 134 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 GIPRP48546 466 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 ZNF91Q05481 1191 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 CCDC58Q4VC31 144 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 C1orf94Q6P1W5 598 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 OR4N4Q8N0Y3 316 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 PARP16Q8N5Y8 322 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 Q8N9G6 341 aaPredicted RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 ISG20Q96AZ6 181 aaKnown RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 ZMYND19Q96E35 227 aaPredicted RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 ZNF700Q9H0M5 742 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 PELI2Q9HAT8 420 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 CNOT2Q9NZN8 540 aaKnown RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 VNN2O95498 520 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 ALDH3B2P48448 385 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 BCL7AQ4VC05 210 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 LRRN1Q6UXK5 716 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 ZNF584Q8IVC4 421 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 FTMTQ8N4E7 242 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 ACOT4Q8N9L9 421 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 CREB3L4Q8TEY5 395 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 THAP3Q8WTV1 239 aaPredicted RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 NUDT8Q8WV74 236 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 CASD1Q96PB1 797 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 OR2S2Q9NQN1 319 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 TAS2R3Q9NYW6 316 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 SLC7A7Q9UM01 511 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 FAM171A2A8MVW0 826 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 PPP1R3DO95685 299 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 SMIM18P0DKX4 95 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 TIMP2P16035 220 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 WDR5P61964 334 aaKnown RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 C6orf132Q5T0Z8 1188 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 PODNL1Q6PEZ8 512 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 PARS2Q7L3T8 475 aaKnown RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 WDR53Q7Z5U6 358 aaPredicted RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 PTRH1Q86Y79 214 aaKnown RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 NLGN4XQ8N0W4 816 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 CPEB1Q9BZB8 566 aaKnown RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 MEIOCA2RUB1 952 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 DEFB110Q30KQ9 67 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 HES5Q5TA89 166 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 AGAP6Q5VW22 663 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 HTR3DQ70Z44 454 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 SLC39A11Q8N1S5 342 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 PEX11GQ96HA9 241 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 AGAP4Q96P64 663 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 SLC22A12Q96S37 553 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 ZNF350Q9GZX5 532 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 USP36Q9P275 1121 aaKnown RBP12.97□□□□□ -0.33
VCP-201ENST00000358901 ABCD2Q9UBJ2 740 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 DHDHQ9UQ10 334 aa12.97□□□□□ -0.33
VCP-201ENST00000358901 KIF13AQ9H1H9 1805 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms