RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ARPC1BO15143 372 aaKnown RBP9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 ECI2O75521 394 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 EPXP11678 715 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 C4BPBP20851 252 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 NOS3P29474 1203 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 ERVPABLB-1P60509 514 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 IL10RBQ08334 325 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 UBXN2BQ14CS0 331 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 ABRAXAS2Q15018 415 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 HEPHL1Q6MZM0 1159 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 GDPGP1Q6ZNW5 385 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 LRRTM1Q86UE6 522 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 DENND6BQ8NEG7 585 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 OR6B3Q8NGW1 331 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 ACOT12Q8WYK0 555 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 KCTD12Q96CX2 325 aaKnown RBP9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 SUV39H2Q9H5I1 410 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 AUNIPQ9H7T9 357 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 GFOD1Q9NXC2 390 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 FEM1BQ9UK73 627 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 FAM96BQ9Y3D0 163 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 BACE2Q9Y5Z0 518 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 NPTNQ9Y639 398 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 YDJCA8MPS7 323 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 ODC1P11926 461 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 OR1G1P47890 313 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 CDC42P60953 191 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 ILF3Q12906 894 aaKnown RBP eCLIP9.1□□□□□ -0.952e-6■■■□□ 15.7
PTCHD4-201ENST00000339488 ADGRF1Q5T601 910 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 CASP12Q6UXS9 341 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 DPPA4Q7L190 304 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 FAM122BQ7Z309 247 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 FGD2Q7Z6J4 655 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 TSEN54Q7Z6J9 526 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 UNC93AQ86WB7 457 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 C4orf19Q8IY42 314 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 IQCF1Q8N6M8 205 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 BSCL2Q96G97 398 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 FAM193BQ96PV7 902 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 CYP2S1Q96SQ9 504 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 TBL1YQ9BQ87 522 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 DPY30Q9C005 99 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 TOLLIPQ9H0E2 274 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 WDR13Q9H1Z4 485 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 MTG2Q9H4K7 406 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 OR12D3Q9UGF7 316 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 PHF11Q9UIL8 331 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 KPNA3O00505 521 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 SEPT4O43236 478 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 GALR3O60755 368 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC25A12O75746 678 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 ACTL6AO96019 429 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 UROSP10746 265 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 ZNF25P17030 456 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 CNR1P21554 472 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 SULT1E1P49888 294 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 STXBP1P61764 594 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 C1DQ13901 141 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 PLEKHN1Q494U1 663 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 KRBOX4Q5JUW0 171 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 LIPJQ5W064 366 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 SWSAP1Q6NVH7 229 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 ACOT1Q86TX2 421 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 TSPAN33Q86UF1 283 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 LAPTM4BQ86VI4 370 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 CALHM3Q86XJ0 350 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 DBF4BQ8NFT6 615 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 NEIL3Q8TAT5 605 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 THAP4Q8WY91 577 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 CCDC17Q96LX7 622 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 OR4K3Q96R72 315 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 GAL3ST4Q96RP7 486 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 ATOH8Q96SQ7 321 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 EDEM2Q9BV94 578 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 TSSK6Q9BXA6 273 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 TREM1Q9NP99 234 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 PPP4R1LQ9P1A2 415 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 METTL1Q9UBP6 276 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 CHRNA9Q9UGM1 479 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 COL2A1P02458 1487 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 A0A1W2PRQ8 180 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 FAM221BA6H8Z2 402 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 DPYSL4O14531 572 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 CILPO75339 1184 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 IL33O95760 270 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 RHOP08100 348 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 NPSP0C0P6 89 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 CCR7P32248 378 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 LUMP51884 338 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 HNRNPKP61978 463 aaKnown RBP eCLIP9.1□□□□□ -0.952e-6■■□□□ 14.5
PTCHD4-201ENST00000339488 DCDP81605 110 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 MLLT11Q13015 90 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 AMHR2Q16671 573 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 SV2CQ496J9 727 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 MINDY4Q4G0A6 757 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 FIGNL1Q6PIW4 674 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 TIPARPQ7Z3E1 657 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 LAS2Q8IYD9 372 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 OSMRQ99650 979 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 EGFL8Q99944 293 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms