RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 MSTNO14793 375 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 ERAL1O75616 437 aaKnown RBP12.89□□□□□ -0.35
RPP40-201ENST00000319533 SASH3O75995 380 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 SUPT7LO94864 414 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 CRHP06850 196 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 HSD17B3P37058 310 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 CCT5P48643 541 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 DIO3P55073 304 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 CDH13P55290 713 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 CLDN18P56856 261 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 TRA2BP62995 288 aaKnown RBP12.89□□□□□ -0.35
RPP40-201ENST00000319533 CLCQ05315 142 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 RASA2Q15283 850 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 POU4F3Q15319 338 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 BCL2A1Q16548 175 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 AAGABQ6PD74 315 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 IFNEQ86WN2 208 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 ADCY4Q8NFM4 1077 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 OR52R1Q8NGF1 315 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 TMCO6Q96DC7 493 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 ERP27Q96DN0 273 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 DTNBP1Q96EV8 351 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 CNRIP1Q96F85 164 aaPredicted RBP12.89□□□□□ -0.35
RPP40-201ENST00000319533 COL21A1Q96P44 957 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 BTBD9Q96Q07 612 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 PIP5K1AQ99755 562 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 NDRG3Q9UGV2 375 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 SNX6Q9UNH7 406 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 SLC12A4Q9UP95 1085 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 STK38LQ9Y2H1 464 aa12.89□□□□□ -0.35
RPP40-201ENST00000319533 A0A1B0GTL3 188 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 A0A1W2PNV4 684 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 A0A1W2PPM1 405 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 FAM171A2A8MVW0 826 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 B4DXG7 233 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 PLOD2O00469 737 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 DLX3O60479 287 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 TSPAN2O60636 221 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 BCAS2O75934 225 aaPredicted RBP12.88□□□□□ -0.35
RPP40-201ENST00000319533 PDYNP01213 254 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 HEXAP06865 529 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 CT45A8P0DMV1 189 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 CT45A9P0DMV2 189 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 PCSK2P16519 638 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 IMPDH1P20839 514 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 ADSLP30566 484 aaPredicted RBP12.88□□□□□ -0.35
RPP40-201ENST00000319533 CPA2P48052 419 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 STARP49675 285 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 PRKAA2P54646 552 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 GAS1P54826 345 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 PSPHP78330 225 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 SRYQ05066 204 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 IFFO1Q0D2I5 559 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 LTB4RQ15722 352 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 CT45A2Q5DJT8 189 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 ZNF628Q5EBL2 1059 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 SGO1Q5FBB7 561 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 ZNF678Q5SXM1 525 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 PLXDC2Q6UX71 529 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 RPS27LQ71UM5 84 aaKnown RBP12.88□□□□□ -0.35
RPP40-201ENST00000319533 GBP7Q8N8V2 638 aaPredicted RBP12.88□□□□□ -0.35
RPP40-201ENST00000319533 EPS8L3Q8TE67 593 aaKnown RBP12.88□□□□□ -0.35
RPP40-201ENST00000319533 TMBIM1Q969X1 311 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 KLHL29Q96CT2 875 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 CCDC126Q96EE4 140 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 TMEM237Q96Q45 408 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 FAIM2Q9BWQ8 316 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 FARSBQ9NSD9 589 aaKnown RBP12.88□□□□□ -0.35
RPP40-201ENST00000319533 EHD3Q9NZN3 535 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 TRPS1Q9UHF7 1281 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 FBXL2Q9UKC9 423 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 WIF1Q9Y5W5 379 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 ZNF780BQ9Y6R6 833 aa12.88□□□□□ -0.35
RPP40-201ENST00000319533 PPP6CO00743 305 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 COPEO14579 308 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 CASKO14936 926 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 SIAH2O43255 324 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 ARHGEF9O43307 516 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 ZIC3O60481 467 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 TGM6O95932 706 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 MYL2P10916 166 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 TSPAN8P19075 237 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 B3GALT5-AS1P59052 145 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 MRPS35P82673 323 aaKnown RBP12.87□□□□□ -0.35
RPP40-201ENST00000319533 EFR3AQ14156 821 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 CASP8Q14790 479 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 CCDC153Q494R4 210 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 LETMD1Q6P1Q0 360 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 PRSS57Q6UWY2 283 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 CLEC9AQ6UXN8 241 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 GPRIN3Q6ZVF9 776 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 GCNT2Q8N0V5 402 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 RIBC1Q8N443 379 aaPredicted RBP12.87□□□□□ -0.35
RPP40-201ENST00000319533 RDH11Q8TC12 318 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 SELENOMQ8WWX9 145 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 ZBTB9Q96C00 473 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 STARD4Q96DR4 205 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 COX4I2Q96KJ9 171 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 VSTM2LQ96N03 204 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 ZNF382Q96SR6 550 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms