RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 YRDCQ86U90 279 aaKnown RBP14.88□□□□□ -0.03
LSM1-201ENST00000311351 EXOC3L1Q86VI1 746 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 MCEMP1Q8IX19 187 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 ULK2Q8IYT8 1036 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 OR1J4Q8NGS1 313 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 PPCDCQ96CD2 204 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 ELP4Q96EB1 424 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 C3orf30Q96M34 536 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 ZIM3Q96PE6 472 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 UCK2Q9BZX2 261 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 TMED5Q9Y3A6 229 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 MYO9AB2RTY4 2548 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 KDM4EB2RXH2 506 aaPredicted RBP14.87□□□□□ -0.03
LSM1-201ENST00000311351 CTIFO43310 598 aaKnown RBP14.87□□□□□ -0.03
LSM1-201ENST00000311351 ITM2AO43736 263 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 PEX11AO75192 247 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 SLITRK5O94991 958 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 ADH7P40394 386 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 WNT3P56703 355 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 SNTA1Q13424 505 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 PDE7AQ13946 482 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 EFR3AQ14156 821 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 NUDCD3Q8IVD9 361 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 WDSUB1Q8N9V3 476 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 FAM83FQ8NEG4 500 aaPredicted RBP14.87□□□□□ -0.03
LSM1-201ENST00000311351 OR10Q1Q8NGQ4 319 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 PPP1R14CQ8TAE6 165 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 ASB5Q8WWX0 329 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 TMCO6Q96DC7 493 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 ZNF764Q96H86 408 aaPredicted RBP14.87□□□□□ -0.03
LSM1-201ENST00000311351 C1orf50Q9BV19 199 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 ZNF395Q9H8N7 513 aaPredicted RBP14.87□□□□□ -0.03
LSM1-201ENST00000311351 EQTNQ9NQ60 294 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 FLRT3Q9NZU0 649 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 SH3BP4Q9P0V3 963 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 WIF1Q9Y5W5 379 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 CREBBPQ92793 2442 aa14.87□□□□□ -0.03
LSM1-201ENST00000311351 A0A0G2JNJ9 132 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 B4DXG7 233 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 TBX19O60806 448 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 CYP4B1P13584 511 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 GPC1P35052 558 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 CHI3L2Q15782 390 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 OR5M10Q6IEU7 315 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 SZRD1Q7Z422 152 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 PPP3R2Q96LZ3 170 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 TIMP4Q99727 224 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 UGT2B28Q9BY64 529 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 TRIM8Q9BZR9 551 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 NPDC1Q9NQX5 325 aaPredicted RBP14.86□□□□□ -0.03
LSM1-201ENST00000311351 Q9UFV3 132 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 FBXL2Q9UKC9 423 aa14.86□□□□□ -0.03
LSM1-201ENST00000311351 SCAMP2O15127 329 aaKnown RBP14.85□□□□□ -0.03
LSM1-201ENST00000311351 SCO2O43819 266 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 HSPA4LO95757 839 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 SERPINE1P05121 402 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 GABRA1P14867 456 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 BMP7P18075 431 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 TCEA1P23193 301 aaKnown RBP14.85□□□□□ -0.03
LSM1-201ENST00000311351 HPCAL1P37235 193 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 ASMTP46597 345 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 RFX3P48380 749 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 PNLIPRP2P54317 469 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 PSPHP78330 225 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 TFF3Q07654 80 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 GAB1Q13480 694 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 MPP2Q14168 576 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 PTGR1Q14914 329 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 ACSF3Q4G176 576 aaPredicted RBP14.85□□□□□ -0.03
LSM1-201ENST00000311351 ATP6AP1LQ52LC2 224 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 TNFAIP8L3Q5GJ75 292 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 VASNQ6EMK4 673 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 SEM1Q6ZVN7 128 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 PLCZ1Q86YW0 608 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 OR7A2PQ8NGA2 310 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 LILRB4Q8NHJ6 448 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 ZFP28Q8NHY6 868 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 FBXO30Q8TB52 745 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 NUDT8Q8WV74 236 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 RNF138Q8WVD3 245 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 LMF2Q9BU23 707 aaKnown RBP14.85□□□□□ -0.03
LSM1-201ENST00000311351 PRDM14Q9GZV8 571 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 Q9N2J8 555 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 SSU72Q9NP77 194 aaKnown RBP14.85□□□□□ -0.03
LSM1-201ENST00000311351 CBLCQ9ULV8 474 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 CAMK2AQ9UQM7 478 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 CSMD1Q96PZ7 3565 aa14.85□□□□□ -0.03
LSM1-201ENST00000311351 POLQO75417 2590 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 DOCK7Q96N67 2140 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 PCNX3Q9H6A9 2034 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 GXYLT2A0PJZ3 443 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 TMEM114B3SHH9 223 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 TOXO94900 526 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 IFI6P09912 130 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 DHRS4L1P0CG22 281 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 GRK2P25098 689 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 MAPK1P28482 360 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 EVI2BP34910 448 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 PTGER4P35408 488 aa14.84□□□□□ -0.03
LSM1-201ENST00000311351 FRKP42685 505 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms