RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CCDC92Q53HC0 331 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 CARD16Q5EG05 197 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ATXN7L2Q5T6C5 722 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 YOD1Q5VVQ6 348 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 HIST2H2BCQ6DN03 193 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PTRHD1Q6GMV3 140 aaKnown RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 OR2T5Q6IEZ7 315 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 KIAA1161Q6NSJ0 714 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 FAHD1Q6P587 224 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SCIMPQ6UWF3 145 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 MACC1Q6ZN28 852 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PLEKHG7Q6ZR37 379 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 EIF3MQ7L2H7 374 aaKnown RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 RAB11FIP2Q7L804 512 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 CHST15Q7LFX5 561 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 LRRC70Q7Z2Q7 622 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 P2RY8Q86VZ1 359 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ZDHHC21Q8IVQ6 265 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 CPNE9Q8IYJ1 553 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 LIX1Q8N485 282 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 CELF2-AS1Q8N7Q2 184 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 L3MBTL4Q8NA19 623 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 LPCAT1Q8NF37 534 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 OR2T29Q8NH02 315 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 RHOXF1Q8NHV9 184 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 MCOLN3Q8TDD5 553 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 CHTF18Q8WVB6 975 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SLC38A4Q969I6 547 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 FBXW5Q969U6 566 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 TSACCQ96A04 125 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ULK4Q96C45 1275 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 FBXL8Q96CD0 374 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF764Q96H86 408 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 OR52E6Q96RD3 313 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 HEPHQ9BQS7 1158 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 CPEB1Q9BZB8 566 aaKnown RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ASPSCR1Q9BZE9 553 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 TM6SF2Q9BZW4 377 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 NXF2Q9GZY0 626 aaKnown RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 NELFAQ9H3P2 528 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 EHD1Q9H4M9 534 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ZDHHC6Q9H6R6 413 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ATP13A3Q9H7F0 1226 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SMURF2Q9HAU4 748 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 MOV10Q9HCE1 1003 aaKnown RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SERHLQ9NQF3 203 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SLC25A37Q9NYZ2 338 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PTGFRNQ9P2B2 879 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ANKMY1Q9P2S6 941 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 Q9UFV3 132 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 APOBEC3BQ9UH17 382 aaKnown RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ENOPH1Q9UHY7 261 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 OSGIN1Q9UJX0 560 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SNX6Q9UNH7 406 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SRPK3Q9UPE1 567 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 USP22Q9UPT9 525 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 CORO2BQ9UQ03 480 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 FAM32AQ9Y421 112 aaKnown RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 FER1L5A0AVI2 2057 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ANKRD12Q6UB98 2062 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PIKFYVEQ9Y2I7 2098 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ITPR3Q14573 2671 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 DOCK10Q96BY6 2186 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 POLEQ07864 2286 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PCNX1Q96RV3 2341 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 C2CD3Q4AC94 2353 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PNMA8CA0A1B0GUJ8 204 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 A0A1W2PRX2 142 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 OR2A25A4D2G3 310 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 HTR3EA5X5Y0 456 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 TMEM247A6NEH6 219 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 MASP2O00187 686 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 FPGTO14772 594 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 B4GAT1O43505 415 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 OR1I1O60431 355 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 UGDHO60701 494 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 SOCS5O75159 536 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 INMTO95050 263 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 NADKO95544 446 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 SERPINA1P01009 418 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 MT-ND1P03886 318 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 RPLP0P05388 317 aaKnown RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 C8GP07360 202 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ANXA5P08758 320 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PRSS56P0CW18 603 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 MPC1LP0DKB6 136 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 LIPCP11150 499 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PCNAP12004 261 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 CCL4P13236 92 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 HSD3B1P14060 373 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 CTPS1P17812 591 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 GPX2P18283 190 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PRPS1L1P21108 318 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 S100A1P23297 94 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 HSD3B2P26439 372 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 CCKBRP32239 447 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ETV6P41212 452 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 RGRP47804 291 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms