RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TMEM251Q8N6I4 163 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 WDSUB1Q8N9V3 476 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 OR8J2Q8NGG1 315 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 SLC22A8Q8TCC7 542 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 TMEM125Q96AQ2 219 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 TUBGCP3Q96CW5 907 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 FAM173AQ9BQD7 235 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 TTTY12Q9BZ98 90 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 NUF2Q9BZD4 464 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 RTN4RQ9BZR6 473 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 ACKR4Q9NPB9 350 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 BRD7Q9NPI1 651 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 SACM1LQ9NTJ5 587 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 SEC14L3Q9UDX4 400 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 PRODH2Q9UF12 536 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 NPIPA5E9PKD4 350 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 AKAP10O43572 662 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 HS6ST1O60243 411 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 FADS1O60427 444 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 NKX2-2O95096 273 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 UNC5CO95185 931 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 IGKV1D-16P01601 117 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 CELA3AP09093 270 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 RFC3P40938 356 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 CA7P43166 264 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 MRPL19P49406 292 aaKnown RBP8.38□□□□□ -1.07
HMGN1-201ENST00000288344 PNLIPRP2P54317 469 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 RPS6KA2Q15349 733 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 PDCD2Q16342 344 aaPredicted RBP8.38□□□□□ -1.07
HMGN1-201ENST00000288344 EPGNQ6UW88 154 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 TMEM107Q6UX40 140 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 APOOLQ6UXV4 268 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 RGS9BPQ6ZS82 235 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 DOLPP1Q86YN1 238 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 SPPL2CQ8IUH8 684 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 KIRREL3Q8IZU9 778 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 TAGAPQ8N103 731 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 FNDC5Q8NAU1 212 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 PPCDCQ96CD2 204 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 OMA1Q96E52 524 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 C7orf26Q96N11 449 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 BBS4Q96RK4 519 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 GAL3ST4Q96RP7 486 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 DMRTA2Q96SC8 542 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 C1orf50Q9BV19 199 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 WDR55Q9H6Y2 383 aaPredicted RBP8.38□□□□□ -1.07
HMGN1-201ENST00000288344 SLCO1B3Q9NPD5 702 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 SLC52A3Q9NQ40 469 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 MIEF1Q9NQG6 463 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 GPATCH2Q9NW75 528 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 GIN1Q9NXP7 522 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 TAS2R9Q9NYW1 312 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 NOP53Q9NZM5 478 aaKnown RBP8.38□□□□□ -1.07
HMGN1-201ENST00000288344 BCAP29Q9UHQ4 241 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 NPIPA1Q9UND3 350 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 ENTPD4Q9Y227 616 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.38□□□□□ -1.07
HMGN1-201ENST00000288344 FBN2P35556 2912 aa8.38□□□□□ -1.07
HMGN1-201ENST00000288344 PHF3Q92576 2039 aaKnown RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 TACC2O95359 2948 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 HMGB1P1B2RPK0 211 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 G3V3Y1 287 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 PDPK1O15530 556 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 SUSD5O60279 629 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 SLC19A2O60779 497 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 ICOSLGO75144 302 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 ERN1O75460 977 aaKnown RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 SNX4O95219 450 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 C1QCP02747 245 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 ZNF24P17028 368 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 LBPP18428 481 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 PPIAP62937 165 aaKnown RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 HBA1P69905 142 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 HSF1Q00613 529 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 SNTA1Q13424 505 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 CYP27C1Q4G0S4 372 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 SLC9B1Q4ZJI4 515 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 TIGD3Q6B0B8 471 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 ZCCHC12Q6PEW1 402 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 GFRALQ6UXV0 394 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 TRILQ7L0X0 811 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 R3HCC1LQ7Z5L2 792 aaKnown RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 PRR22Q8IZ63 422 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 SLC34A3Q8N130 599 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 NATD1Q8N6N6 113 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 SLC16A11Q8NCK7 471 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 GOT1L1Q8NHS2 421 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 PIWIL2Q8TC59 973 aaKnown RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 MGARPQ8TDB4 240 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 ACTRT2Q8TDY3 377 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 CKAP2Q8WWK9 683 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 OR5P2Q8WZ92 322 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 DIO2Q92813 273 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 TMBIM1Q969X1 311 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 TESCQ96BS2 214 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 FAM120BQ96EK7 910 aaKnown RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 ZBED6CLQ96FA7 236 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 C16orf58Q96GQ5 468 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 TMEM41AQ96HV5 264 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 OR52B2Q96RD2 323 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms