RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 SLC25A46Q96AG3 418 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 ZNF354BQ96LW1 612 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 TMEM121BQ9BXQ6 578 aaPredicted RBP15.34■□□□□ 0.05
SREBF1-201ENST00000261646 MKKSQ9NPJ1 570 aaPredicted RBP15.34■□□□□ 0.05
SREBF1-201ENST00000261646 SH2B3Q9UQQ2 575 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 TMEM5Q9Y2B1 443 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 SLC22A31A6NKX4 558 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 CXCL14O95715 111 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 SLC35G6P0C7Q6 338 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 HLA-DMAP28067 261 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 GABRA5P31644 462 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 GNALP38405 381 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 TRAM1Q15629 374 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 ZNF362Q5T0B9 420 aaPredicted RBP15.33■□□□□ 0.05
SREBF1-201ENST00000261646 TMPRSS12Q86WS5 348 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 PM20D2Q8IYS1 436 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 LMNTD1Q8N9Z9 388 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 C7orf34Q96L11 122 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 EGLN3Q9H6Z9 239 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 C14orf105Q9NVL8 296 aa15.33■□□□□ 0.05
SREBF1-201ENST00000261646 CXXC1Q9P0U4 656 aaPredicted RBP15.33■□□□□ 0.05
SREBF1-201ENST00000261646 ZNF705EA8MWA4 302 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-201ENST00000261646 PSMD9O00233 223 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 LRRTM2O43300 516 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 ARAFP10398 606 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 ACP2P11117 423 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 AHRP35869 848 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 MAP3K8P41279 467 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 OC90Q02509 493 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-201ENST00000261646 ILKQ13418 452 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 OPCMLQ14982 345 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 NXPE4Q6UWF7 544 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 BEST3Q8N1M1 668 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 FBXO15Q8NCQ5 510 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-201ENST00000261646 ASB11Q8WXH4 323 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 CNOT9Q92600 299 aaKnown RBP15.33■□□□□ 0.04
SREBF1-201ENST00000261646 HSPA12BQ96MM6 686 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 SRRQ9GZT4 340 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 ATP13A2Q9NQ11 1180 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 SCP2D1Q9UJQ7 156 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 RLN2P04090 185 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 IGFBP1P08833 259 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-201ENST00000261646 ACP5P13686 325 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 IL1RNP18510 177 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 CMPK1P30085 196 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 MMP12P39900 470 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 WASP42768 502 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 FAM76BQ5HYJ3 339 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 GABARAPL1Q9H0R8 117 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 SLAMF7Q9NQ25 335 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 NDOR1Q9UHB4 597 aa15.33■□□□□ 0.04
SREBF1-201ENST00000261646 UGDHO60701 494 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 SNAPC5O75971 98 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 PRR35P0CG20 571 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 ACVR1Q04771 509 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 SMUG1Q53HV7 270 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 TMC8Q8IU68 726 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 RBPMSQ93062 196 aaKnown RBP15.32■□□□□ 0.04
SREBF1-201ENST00000261646 C1QTNF3Q9BXJ4 246 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 CDCA4Q9BXL8 241 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 GSX2Q9BZM3 304 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 IFT46Q9NQC8 304 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 OR2S2Q9NQN1 319 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 SIRT5Q9NXA8 310 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 COPS3Q9UNS2 423 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 AP1M2Q9Y6Q5 423 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 FEZF1A0PJY2 475 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 KIR2DL3P43628 341 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 PTH2RP49190 550 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 EIF2B5Q13144 721 aaKnown RBP15.32■□□□□ 0.04
SREBF1-201ENST00000261646 TSC22D1Q15714 1073 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 HDDC3Q8N4P3 179 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 OR5W2Q8NH69 310 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 STOML3Q8TAV4 291 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 DOK4Q8TEW6 326 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 HAVCR1Q96D42 359 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 TRIM2Q9C040 744 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 MFFQ9GZY8 342 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 BRF2Q9HAW0 419 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 PHPT1Q9NRX4 125 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-201ENST00000261646 KLHL9Q9P2J3 617 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 XIRP1Q702N8 1843 aaKnown RBP15.32■□□□□ 0.04
SREBF1-201ENST00000261646 MCIDASD6RGH6 385 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 TCRBP04435 133 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 BTN3A2P78410 334 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 SYPL1Q16563 259 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 ACSM3Q53FZ2 586 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 KLHL26Q53HC5 615 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 TOR2AQ5JU69 321 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 TMEM107Q6UX40 140 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 ACTL8Q9H568 366 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 ZNF226Q9NYT6 803 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 MRPS23Q9Y3D9 190 aaKnown RBP15.32■□□□□ 0.04
SREBF1-201ENST00000261646 PAK4O96013 591 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-201ENST00000261646 PRH1P02810 166 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 MCCD1P59942 119 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-201ENST00000261646 ZNF33BQ06732 778 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 LCN9Q8WX39 176 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 NUS1Q96E22 293 aa15.32■□□□□ 0.04
SREBF1-201ENST00000261646 PTTG3PQ9NZH4 202 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms