RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 MEGF11A6BM72 1044 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ZSCAN5BA6NJL1 495 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 DISC1C4P0D8 188 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 H7C2Y5 167 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 PAPSS1O43252 624 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 VAMP5O95183 116 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 METTL18O95568 372 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 AKR1C4P17516 323 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 BGNP21810 368 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ELAVL4P26378 380 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 PCGF2P35227 344 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 MAGEA3P43357 314 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 TPMTP51580 245 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ACTC1P68032 377 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ACTA1P68133 377 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 CRADDP78560 199 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 CDK3Q00526 305 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 FAPQ12884 760 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GNMTQ14749 295 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 LASP1Q14847 261 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 MSMO1Q15800 293 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 MICAQ29983 383 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SLC5A9Q2M3M2 681 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 PERM1Q5SV97 790 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 KDM4DQ6B0I6 523 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SLC18B1Q6NT16 456 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SLC51AQ86UW1 340 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 MEX3DQ86XN8 651 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 KIAA1958Q8N8K9 716 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 FAM47BQ8NA70 645 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 LNX1Q8TBB1 728 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 PIWIL2Q8TC59 973 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 LRTOMTQ8WZ04 291 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 OR1E3Q8WZA6 343 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 CPXM1Q96SM3 734 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 MNTQ99583 582 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GPR22Q99680 433 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 MCHR1Q99705 422 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ATP5SQ99766 215 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 LHPPQ9H008 270 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SH3BGRL3Q9H299 93 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 CDC42EP4Q9H3Q1 356 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 MS4A5Q9H3V2 200 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 DPH3P1Q9H4G8 78 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ANKRA2Q9H9E1 313 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 CALHM2Q9HA72 323 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 UBTD1Q9HAC8 227 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SLCO3A1Q9UIG8 710 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 KLHL21Q9UJP4 597 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 RNF150Q9ULK6 438 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 CDC42BPBQ9Y5S2 1711 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 C2orf78A6NCI8 922 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 C21orf140B9A014 251 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 K7EQM0 130 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SPINT2O43291 252 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 LIASO43766 372 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 FZD7O75084 574 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 TGDSO95455 350 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 TMEM225BP0DP42 221 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ZNF44P15621 663 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 PRKCAP17252 672 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 NDUFB7P17568 137 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 CD9P21926 228 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 F2RP25116 425 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 AQP1P29972 269 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 MTNR1AP48039 350 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ART1P52961 327 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ERVFC1P60507 584 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SLC35B1P78383 322 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 TARDBPQ13148 414 aaKnown RBP eCLIP3.82□□□□□ -1.83e-7■■■■■ 28.9
RNF38-201ENST00000259605 GPR176Q14439 515 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 DEFB110Q30KQ9 67 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 PTCHD3Q3KNS1 767 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ZNF718Q3SXZ3 478 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 NHSL2Q5HYW2 709 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 TXNRD3NBQ6F5E7 133 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 OR4C11Q6IEV9 310 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 OR7E24Q6IFN5 339 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GPR153Q6NV75 609 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 C19orf48Q6RUI8 117 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 OLFML1Q6UWY5 402 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 VWA5B2Q8N398 1253 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 FAM109AQ8N4B1 249 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GATSQ8NAP1 163 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 RHEBL1Q8TAI7 183 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 LGALS12Q96DT0 336 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 MVB12AQ96EY5 273 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 C11orf24Q96F05 449 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 ZNF285Q96NJ3 590 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SPIN2AQ99865 258 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SPIN2BQ9BPZ2 258 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 NUDT16L1Q9BRJ7 211 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 TMEM208Q9BTX3 173 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 EBPLQ9BY08 206 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 AGXT2Q9BYV1 514 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SLC22A4Q9H015 551 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SHARPINQ9H0F6 387 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 CCM2LQ9NUG4 571 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 NUFIP1Q9UHK0 495 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms