RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PRAMEF17Q5VTA0 474 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 MLIPQ5VWP3 458 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 FAHD1Q6P587 224 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 ZNF574Q6ZN55 896 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-219ENST00000641513 CCDC80Q76M96 950 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 TMPRSS9Q7Z410 1059 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 WDR53Q7Z5U6 358 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-219ENST00000641513 TSPYL5Q86VY4 417 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-219ENST00000641513 KRT73Q86Y46 540 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 ANKRD13BQ86YJ7 626 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 ZNF595Q8IYB9 648 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 SPARTQ8N0X7 666 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 SMYD1Q8NB12 490 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 DRAXINQ8NBI3 349 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-219ENST00000641513 OR4D9Q8NGE8 314 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 FNDC8Q8TC99 324 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 RHBDD1Q8TEB9 315 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-219ENST00000641513 IPCEF1Q8WWN9 437 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-219ENST00000641513 SLC9A6Q92581 669 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 FCGR1BQ92637 280 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 ATOH1Q92858 354 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-219ENST00000641513 ANKRD9Q96BM1 317 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-219ENST00000641513 TAMM41Q96BW9 452 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 COL21A1Q96P44 957 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 DGAT2Q96PD7 388 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 OR6C1Q96RD1 312 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 DOHHQ9BU89 302 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 GABARAPL3Q9BY60 117 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 DUSP21Q9H596 190 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 RUBCNLQ9H714 662 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 CACYBPQ9HB71 228 aaKnown RBP8.28□□□□□ -1.08
PHGDH-219ENST00000641513 ZNF304Q9HCX3 659 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 PTGFRNQ9P2B2 879 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 FTSJ1Q9UET6 329 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 ENOPH1Q9UHY7 261 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 TPRKBQ9Y3C4 175 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 PCDHGA5Q9Y5G8 931 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 SNX5Q9Y5X3 404 aa8.28□□□□□ -1.08
PHGDH-219ENST00000641513 ASCC3Q8N3C0 2202 aaKnown RBP8.27□□□□□ -1.08
PHGDH-219ENST00000641513 IGHV5-10-1A0A0J9YXX1 117 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ARRDC5A6NEK1 342 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 DUXAA6NLW8 204 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 GALR2O43603 387 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 HS6ST1O60243 411 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 GCM2O75603 506 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 SERPINB7O75635 380 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 SEC24DO94855 1032 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 CLIC3O95833 236 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ATP1B1P05026 303 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ALOX5P09917 674 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 TFPTP0C1Z6 253 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 SLC35E2P0CK97 266 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF12P17014 697 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ACVR2AP27037 513 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 GRK6P43250 576 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 CRISP3P54108 245 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 TPD52P55327 224 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF155Q12901 538 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 FOXD4Q12950 439 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 PPP1R8Q12972 351 aaKnown RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 SQSTM1Q13501 440 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 MINDY4Q4G0A6 757 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 TRMT12Q53H54 448 aaKnown RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 CRB2Q5IJ48 1285 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 YOD1Q5VVQ6 348 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 CDC73Q6P1J9 531 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ISLR2Q6UXK2 745 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 OLIG3Q7RTU3 272 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 HMGN2P46Q86SG4 172 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ARMC8Q8IUR7 673 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 SVOPQ8N4V2 548 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 B4GALNT2Q8NHY0 566 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 BBS10Q8TAM1 723 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 PROX1Q92786 737 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 CDS1Q92903 461 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 RIT1Q92963 219 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF501Q96CX3 271 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 CLIP3Q96DZ5 547 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 RBM18Q96H35 190 aaKnown RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 PTCHD1Q96NR3 888 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 NODALQ96S42 347 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF347Q96SE7 839 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 CNPPD1Q9BV87 410 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 SPATA5L1Q9BVQ7 753 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ALOXE3Q9BYJ1 711 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 NECTIN3Q9NQS3 549 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 THSD1Q9NS62 852 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 TBC1D23Q9NUY8 699 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 EXD2Q9NVH0 621 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 MAT2BQ9NZL9 334 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 SEMA5BQ9P283 1151 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 SEC14L3Q9UDX4 400 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ENPP5Q9UJA9 477 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 RARRES3Q9UL19 164 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 NDRG4Q9ULP0 352 aaKnown RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ABCG2Q9UNQ0 655 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF451Q9Y4E5 1061 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 TMEM184BQ9Y519 407 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-219ENST00000641513 U3KQV3 271 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms