RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 FAM27D1Q5T7N8 215 aa13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 ASB18Q6ZVZ8 466 aa13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 ERN2Q76MJ5 926 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 NRMQ8IXM6 262 aa13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 NRSN1Q8IZ57 195 aa13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 FBXL6Q8N531 539 aa13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 SETD7Q8WTS6 366 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 SUSD6Q92537 303 aa13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 RHBGQ9H310 441 aa13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 SPHK1Q9NYA1 384 aa13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 GPSM3Q9Y4H4 160 aa13.19□□□□□ -0.3
CACNA1A-228ENST00000636610 LOC102723532A0A0G2JNH3 316 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 A0A1W2PPK0 400 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 OR6C70A6NIJ9 312 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 SOCS6O14544 535 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 MID1O15344 667 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 HOXC11O43248 304 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 CPNE3O75131 537 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 MYL9P24844 172 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 AHRP35869 848 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 MNX1P50219 401 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 PCDH1Q08174 1060 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 DDI2Q5TDH0 399 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 CNIH2Q6PI25 160 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 MARCH9Q86YJ5 346 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 KLBQ86Z14 1044 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 KLHDC8AQ8IYD2 350 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 OR51G2Q8NGK0 314 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 BBS10Q8TAM1 723 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 WACQ9BTA9 647 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 RMI1Q9H9A7 625 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 C3orf14Q9HBI5 128 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 PAK6Q9NQU5 681 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 PLXNA2O75051 1894 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 LRIT2A6NDA9 550 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 ZNF860A6NHJ4 632 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 NTSP30990 170 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 TRIM23P36406 574 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 ETV6P41212 452 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 CDH11P55287 796 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 ELOAQ14241 798 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 LRRC32Q14392 662 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 ELAVL3Q14576 367 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC9A5Q14940 896 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC27A4Q6P1M0 643 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 SYCE2Q6PIF2 218 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 ZNF557Q8N988 423 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 KCT2Q8NC54 265 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 TMEM255BQ8WV15 326 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 HHIPL1Q96JK4 782 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 FAM83CQ9BQN1 747 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 SNX7Q9UNH6 387 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 MTCL1Q9Y4B5 1905 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 WDR87Q6ZQQ6 2873 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 CENPVL1A0A0U1RR11 272 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 FAM25AB3EWG3 89 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 FAM25CB3EWG5 89 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 FAM25GB3EWG6 89 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC30A4O14863 429 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 PLA2G10O15496 165 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 MRPL3P09001 348 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 CCNYL3P0C7X3 344 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 PIPP12273 146 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 SMSP52788 366 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 CSTF1Q05048 431 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 KLHL12Q53G59 568 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 Q8N402 240 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 ACOT4Q8N9L9 421 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 FBXO15Q8NCQ5 510 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 MORN4Q8NDC4 146 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 ZCCHC10Q8TBK6 192 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 SECISBP2Q96T21 854 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 ISG20L2Q9H9L3 353 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 INSL6Q9Y581 213 aa13.18□□□□□ -0.3
CACNA1A-228ENST00000636610 B4DXG7 233 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 NDUFB5O43674 189 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 TSC22D2O75157 780 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 DNAJB6O75190 326 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 AIFM1O95831 613 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 GKN3PP0CG01 181 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 LIMS3P0CW19 117 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 LIMS4P0CW20 117 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC2A2P11168 524 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 ZNF24P17028 368 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 TAS2R38P59533 333 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 MEDAGQ5VYS4 303 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 ZNF57Q68EA5 555 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 MTFR2Q6P444 385 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 C16orf62Q7Z3J2 963 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 ASCC1Q8N9N2 400 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 POLDIP3Q9BY77 421 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 DDX31Q9H8H2 851 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 DIMT1Q9UNQ2 313 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 KIAA1671Q9BY89 1806 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 A0A1W2PP55 124 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 A0A1W2PRQ8 180 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 A8MVJ9 347 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC9A3P48764 834 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 RGS8P57771 180 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms