RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SRFBP1Q8NEF9 429 aaKnown RBP12.4□□□□□ -0.42
SNX1-214ENST00000625244 C17orf47Q8NEP4 570 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 OR6K3Q8NGY3 331 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 OMA1Q96E52 524 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 SERPINB12Q96P63 405 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 EGFL8Q99944 293 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 RAB17Q9H0T7 212 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 XAB2Q9HCS7 855 aaKnown RBP12.4□□□□□ -0.42
SNX1-214ENST00000625244 ZNF281Q9Y2X9 895 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 UTP11Q9Y3A2 253 aaKnown RBP12.4□□□□□ -0.42
SNX1-214ENST00000625244 UQCRHLA0A096LP55 91 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 MAGEB16A2A368 324 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 DPRXA6NFQ7 191 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 C17orf51A8MQB3 221 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 EFCAB8A8MWE9 144 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 FESP07332 822 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 CTAGE8P0CG41 777 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 GPX3P22352 226 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 SLC6A8P48029 635 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 CLDN20P56880 219 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 EEFSECP57772 596 aaKnown RBP12.39□□□□□ -0.43
SNX1-214ENST00000625244 PDAP1Q13442 181 aaKnown RBP12.39□□□□□ -0.43
SNX1-214ENST00000625244 DOC2AQ14183 400 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 ANKRD22Q5VYY1 191 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 C8orf74Q6P047 294 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 ZNF572Q7Z3I7 529 aaPredicted RBP12.39□□□□□ -0.43
SNX1-214ENST00000625244 CTAGE4Q8IX94 777 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 AGGF1Q8N302 714 aaeCLIP12.39□□□□□ -0.43
SNX1-214ENST00000625244 PRR14Q9BWN1 585 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 FAIMQ9NVQ4 179 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 MS4A12Q9NXJ0 267 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 EMC9Q9Y3B6 208 aa12.39□□□□□ -0.43
SNX1-214ENST00000625244 NPEPPSL1A6NEC2 478 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 SDR42E2A6NKP2 422 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 ESPNB1AK53 854 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 SHISA9B4DS77 424 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 DNALI1O14645 258 aaPredicted RBP12.38□□□□□ -0.43
SNX1-214ENST00000625244 TGFB1P01137 390 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 AHSGP02765 367 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 ALDOAP04075 364 aaKnown RBP12.38□□□□□ -0.43
SNX1-214ENST00000625244 SLC35E2BP0CK96 405 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 SLC35E2P0CK97 266 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 MLNP12872 115 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 IL11P20809 199 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 TLX1P31314 330 aaPredicted RBP12.38□□□□□ -0.43
SNX1-214ENST00000625244 MAGEA6P43360 314 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 HNMTP50135 292 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 PLCXD2Q0VAA5 305 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 CALCOCO2Q13137 446 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 GGTLC2Q14390 218 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 MORF4L2Q15014 288 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 TAB1Q15750 504 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 TMEM35AQ53FP2 167 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 AGAP6Q5VW22 663 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 OR4C11Q6IEV9 310 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 C11orf71Q6IPW1 123 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 SEZ6L2Q6UXD5 910 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 BEND4Q6ZU67 534 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 BANPQ8N9N5 519 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 STEAP2Q8NFT2 490 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 SEMA6DQ8NFY4 1073 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 ZNF473Q8WTR7 871 aaKnown RBP12.38□□□□□ -0.43
SNX1-214ENST00000625244 PDLIM5Q96HC4 596 aaKnown RBP12.38□□□□□ -0.43
SNX1-214ENST00000625244 FAM167BQ9BTA0 163 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 TRIM31Q9BZY9 425 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 EHD1Q9H4M9 534 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 DNAJC11Q9NVH1 559 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 GPRC5BQ9NZH0 403 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 ZNF337Q9Y3M9 751 aa12.38□□□□□ -0.43
SNX1-214ENST00000625244 GOLGA8MH3BSY2 632 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 CLGNO14967 610 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 TGFAP01135 160 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 PYGBP11216 843 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 ADH6P28332 368 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 DEKP35659 375 aaKnown RBP12.37□□□□□ -0.43
SNX1-214ENST00000625244 CTBP2P56545 445 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 ACTG1P63261 375 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 CDKL1Q00532 357 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 RAB35Q15286 201 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 FIGNL1Q6PIW4 674 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 GALNT12Q8IXK2 581 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 MCUQ8NE86 351 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 OR5M1Q8NGP8 315 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 ZFAND2BQ8WV99 257 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 WDR34Q96EX3 536 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 FOLH1BQ9HBA9 442 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 NGBQ9NPG2 151 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 FANCFQ9NPI8 374 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 PHF11Q9UIL8 331 aa12.37□□□□□ -0.43
SNX1-214ENST00000625244 A0A1W2PR48 441 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 TMEM89A2RUT3 159 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 RAD51CO43502 376 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 ZNF500O60304 480 aaPredicted RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 SS18L1O75177 396 aaPredicted RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 LY6HO94772 140 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 CCDC166P0CW27 439 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 FCGR2AP12318 317 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 CREB1P16220 341 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 S1PR1P21453 382 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms