RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 INAVAQ3KP66 663 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 C1orf94Q6P1W5 598 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 TMEFF1Q8IYR6 380 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 ZNF687Q8N1G0 1237 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 TSTD1Q8NFU3 115 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 TRUB1Q8WWH5 349 aaKnown RBP18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 CDS1Q92903 461 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 SLC6A18Q96N87 628 aa18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 TRIM45Q9H8W5 580 aaPredicted RBP18.45■□□□□ 0.54
PCDHB11-202ENST00000624887 CYR61O00622 381 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 GALR3O60755 368 aaPredicted RBP18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 FRRS1Q6ZNA5 592 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 ZNF438Q7Z4V0 828 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 IQCHQ86VS3 1027 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 GJD3Q8N144 294 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 SIMC1Q8NDZ2 872 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 OR52P1PQ8NH57 321 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 RLN3Q8WXF3 142 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 SLC9A6Q92581 669 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 LRRC61Q9BV99 259 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 POMT2Q9UKY4 750 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 C19orf53Q9UNZ5 99 aaPredicted RBP18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 GPR55Q9Y2T6 319 aaPredicted RBP18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 TDRD6O60522 2096 aaKnown RBP18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 M0R082 166 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 ZNF217O75362 1048 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 ATP1B1P05026 303 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 LIPAP38571 399 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 SLC15A1P46059 708 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 TIGD6Q17RP2 521 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 ARHGAP11BQ3KRB8 267 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 TRMT12Q53H54 448 aaKnown RBP18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 TMEM201Q5SNT2 666 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 FHL5Q5TD97 284 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 ARMC6Q6NXE6 501 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 FAM160A2Q8N612 972 aaPredicted RBP18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 OR5T3Q8NGG3 340 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 NDNFQ8TB73 568 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 ZNF675Q8TD23 568 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 BORCS5Q969J3 196 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 CDCA4Q9BXL8 241 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 SEMA6CQ9H3T2 930 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 MTHFD2LQ9H903 347 aaPredicted RBP18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 LMAN1LQ9HAT1 526 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 SLC25A19Q9HC21 320 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 CTPS2Q9NRF8 586 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 KLHL28Q9NXS3 571 aa18.44■□□□□ 0.54
PCDHB11-202ENST00000624887 IGHV1OR15-9A0A0B4J2B8 117 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 FGF17O60258 216 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 LDB3O75112 727 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 GPR75O95800 540 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 ADORA3P0DMS8 318 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 PIPP12273 146 aaPredicted RBP18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 TYRP1P17643 537 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 BMXP51813 675 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 VSX2P58304 361 aaPredicted RBP18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 TAS2R41P59536 307 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 VBP1P61758 197 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 LSM3P62310 102 aaKnown RBP18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 ID2Q02363 134 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 DUSP5Q16690 384 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 CASP12Q6UXS9 341 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 CA13Q8N1Q1 262 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 TMEM52Q8NDY8 209 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 C9orf43Q8TAL5 461 aaPredicted RBP18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 DIO2Q92813 273 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 CRELD1Q96HD1 420 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 Q96MT0 163 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 GUCD1Q96NT3 240 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 IL4I1Q96RQ9 567 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 CCDC3Q9BQI4 270 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 MKLN1Q9UL63 735 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 IFT52Q9Y366 437 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 SCN2AQ99250 2005 aa18.43■□□□□ 0.54
PCDHB11-202ENST00000624887 A0A087WUU8 490 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 A0A087WV62 115 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 B4DGG1 531 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 M0R3G1 203 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 CYP7B1O75881 506 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 ACP2P11117 423 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 ST6GAL1P15907 406 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 TNNI3P19429 210 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 LSM11P83369 360 aaKnown RBP eCLIP18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 SHC2P98077 582 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 GAS6Q14393 721 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 SYT16Q17RD7 645 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 ENTPD8Q5MY95 495 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 EXOSC6Q5RKV6 272 aaKnown RBP18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 TYW3Q6IPR3 259 aaKnown RBP18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 ZBTB46Q86UZ6 589 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 OR8J1Q8NGP2 316 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 LGALS12Q96DT0 336 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 TPSD1Q9BZJ3 242 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 FAM60AQ9NP50 221 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 TBCCD1Q9NVR7 557 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 WDR45Q9Y484 360 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 FRS3O43559 492 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 HCRTR1O43613 425 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 PLOD3O60568 738 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 PFDN1O60925 122 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms