RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 METTL21EPA6NDL7 271 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 FAM170BA6NMN3 283 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 MPTX1A8MV57 137 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 NRP2O60462 931 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 ATG12O94817 140 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 PCCBP05166 539 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 EBLN1P0CF75 366 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 COX4I1P13073 169 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 SPI1P17947 270 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 PRPH2P23942 346 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 MS4A2Q01362 244 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 ASAH1Q13510 395 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 GAS6Q14393 721 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 INPP5AQ14642 412 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 LAYNQ6UX15 382 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 UBE2R2Q712K3 238 aaPredicted RBP8.31□□□□□ -1.08
VPS11-206ENST00000614944 CUZD1Q86UP6 607 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 TPRA1Q86W33 373 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 AMZ2Q86W34 360 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 OFCC1Q8IZS5 231 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 TMEM132CQ8N3T6 1108 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 SVOPLQ8N434 492 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 LRRC17Q8N6Y2 441 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 MARK4Q96L34 752 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 LRFN5Q96NI6 719 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 SLC32A1Q9H598 525 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 ZNF385DQ9H6B1 395 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 SLAMF7Q9NQ25 335 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 ASCL3Q9NQ33 180 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 PPP4R1LQ9P1A2 415 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 HEBP2Q9Y5Z4 205 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 TBC1D3DA0A087WVF3 549 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 TBC1D3IA0A087WXS9 549 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 TBC1D3EA0A087X179 549 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 TBC1D3KA0A087X1G2 549 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 TBC1D3FA6NER0 549 aaPredicted RBP8.31□□□□□ -1.08
VPS11-206ENST00000614944 TBC1D3LB9A6J9 549 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 AIM2O14862 343 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 SCAMP2O15127 329 aaKnown RBP8.31□□□□□ -1.08
VPS11-206ENST00000614944 TRIM3O75382 744 aaPredicted RBP8.31□□□□□ -1.08
VPS11-206ENST00000614944 C1orf105O95561 183 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 CLIC3O95833 236 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 ALPLP05186 524 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 HIST1H2AGP0C0S8 130 aaPredicted RBP8.31□□□□□ -1.08
VPS11-206ENST00000614944 TBC1D3HP0C7X1 549 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 UROSP10746 265 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 HIST1H2ADP20671 130 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 CRATP43155 626 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 ARSFP54793 590 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 LSM3P62310 102 aaKnown RBP8.31□□□□□ -1.08
VPS11-206ENST00000614944 PPP2CBP62714 309 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 PPP2CAP67775 309 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 ZNF528Q3MIS6 628 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 FLYWCH1Q4VC44 716 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 PIGGQ5H8A4 983 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 LIPJQ5W064 366 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 TBC1D3GQ6DHY5 549 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 TBC1D3CQ6IPX1 549 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 RAB12Q6IQ22 244 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 RBMS3Q6XE24 437 aaKnown RBP8.31□□□□□ -1.08
VPS11-206ENST00000614944 TBC1D3Q8IZP1 549 aaPredicted RBP8.31□□□□□ -1.08
VPS11-206ENST00000614944 SPATA6LQ8N4H0 392 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 ZNF781Q8N8C0 355 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 L3MBTL4Q8NA19 623 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 PCNPQ8WW12 178 aaKnown RBP8.31□□□□□ -1.08
VPS11-206ENST00000614944 FBXL20Q96IG2 436 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 HIST1H2AHQ96KK5 128 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 HIST1H2AJQ99878 128 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 H2AFJQ9BTM1 129 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 RAB11FIP5Q9BXF6 653 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 CLEC4MQ9H2X3 399 aaPredicted RBP8.31□□□□□ -1.08
VPS11-206ENST00000614944 DUSP22Q9NRW4 184 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 PPT2Q9UMR5 302 aa8.31□□□□□ -1.08
VPS11-206ENST00000614944 CEP290O15078 2479 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 OTCP00480 354 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 RAF1P04049 648 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 PRR35P0CG20 571 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 TDGF1P13385 188 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 PAICSP22234 425 aaKnown RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 IDH3AP50213 366 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 GPR143P51810 404 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 XKP51811 444 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 CDH13P55290 713 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 PRKCDQ05655 676 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 SIGLEC14Q08ET2 396 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 ALG11Q2TAA5 492 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 ZNF404Q494X3 552 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 Q6ZS52 159 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 ZCCHC23Q6ZST2 131 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 MAVSQ7Z434 540 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 TGIF2LXQ8IUE1 241 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 C9orf62Q8N4C0 152 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 DHRSXQ8N5I4 330 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 SLC24A4Q8NFF2 622 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 BMFQ96LC9 184 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 WDR92Q96MX6 357 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 ALOXE3Q9BYJ1 711 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 ASIC5Q9NY37 505 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 SH3BP4Q9P0V3 963 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 NDRG2Q9UN36 371 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms