RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 BCL2A1Q16548 175 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 TRMT12Q53H54 448 aaKnown RBP19.19■□□□□ 0.66
PNKP-212ENST00000599454 SGO1Q5FBB7 561 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 OR2A2Q6IF42 318 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 ZNF675Q8TD23 568 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 PIGTQ969N2 578 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 TMBIM1Q969X1 311 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 CNRIP1Q96F85 164 aaPredicted RBP19.19■□□□□ 0.66
PNKP-212ENST00000599454 ZNF681Q96N22 645 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 NSUN5Q96P11 429 aaKnown RBP19.19■□□□□ 0.66
PNKP-212ENST00000599454 BTBD9Q96Q07 612 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 ZNF395Q9H8N7 513 aaPredicted RBP19.19■□□□□ 0.66
PNKP-212ENST00000599454 SNX6Q9UNH7 406 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 A0A1W2PNV4 684 aa19.18■□□□□ 0.66
PNKP-212ENST00000599454 OTCP00480 354 aa19.18■□□□□ 0.66
PNKP-212ENST00000599454 PCSK2P16519 638 aa19.18■□□□□ 0.66
PNKP-212ENST00000599454 STARP49675 285 aa19.18■□□□□ 0.66
PNKP-212ENST00000599454 TRADDQ15628 312 aa19.18■□□□□ 0.66
PNKP-212ENST00000599454 TSNAXIP1Q2TAA8 658 aa19.18■□□□□ 0.66
PNKP-212ENST00000599454 Q71RC1 249 aaPredicted RBP19.18■□□□□ 0.66
PNKP-212ENST00000599454 P3H2Q8IVL5 708 aa19.18■□□□□ 0.66
PNKP-212ENST00000599454 SELENOMQ8WWX9 145 aa19.18■□□□□ 0.66
PNKP-212ENST00000599454 XPR1Q9UBH6 696 aa19.18■□□□□ 0.66
PNKP-212ENST00000599454 DKKL1Q9UK85 242 aa19.18■□□□□ 0.66
PNKP-212ENST00000599454 RAI1Q7Z5J4 1906 aaPredicted RBP19.17■□□□□ 0.66
PNKP-212ENST00000599454 SMPD2O60906 423 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 PDYNP01213 254 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 RPS17P08708 135 aaKnown RBP19.17■□□□□ 0.66
PNKP-212ENST00000599454 COL6A2P12110 1019 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 KRT20P35900 424 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 CPOXP36551 454 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 MAGEA12P43365 314 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 ALDH9A1P49189 494 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 DUSP2Q05923 314 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 LTB4RQ15722 352 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 CHMP1BQ7LBR1 199 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 P4HA3Q7Z4N8 544 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 SAMD14Q8IZD0 417 aaPredicted RBP19.17■□□□□ 0.66
PNKP-212ENST00000599454 SIMC1Q8NDZ2 872 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 ZNF592Q92610 1267 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 ARSGQ96EG1 525 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 ACSS3Q9H6R3 686 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 ZNF226Q9NYT6 803 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 FBXL2Q9UKC9 423 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 UTS2RQ9UKP6 389 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 ROS1P08922 2347 aa19.17■□□□□ 0.66
PNKP-212ENST00000599454 CTIFO43310 598 aaKnown RBP19.16■□□□□ 0.66
PNKP-212ENST00000599454 TSPAN2O60636 221 aa19.16■□□□□ 0.66
PNKP-212ENST00000599454 MRPS22P82650 360 aaKnown RBP19.16■□□□□ 0.66
PNKP-212ENST00000599454 MRPS35P82673 323 aaKnown RBP19.16■□□□□ 0.66
PNKP-212ENST00000599454 ZNF628Q5EBL2 1059 aa19.16■□□□□ 0.66
PNKP-212ENST00000599454 Q5PR19 223 aa19.16■□□□□ 0.66
PNKP-212ENST00000599454 C1orf52Q8N6N3 182 aaKnown RBP19.16■□□□□ 0.66
PNKP-212ENST00000599454 RNF138Q8WVD3 245 aa19.16■□□□□ 0.66
PNKP-212ENST00000599454 ADOQ96SZ5 270 aa19.16■□□□□ 0.66
PNKP-212ENST00000599454 FARSBQ9NSD9 589 aaKnown RBP19.16■□□□□ 0.66
PNKP-212ENST00000599454 TRPS1Q9UHF7 1281 aa19.16■□□□□ 0.66
PNKP-212ENST00000599454 HIVEP2P31629 2446 aa19.16■□□□□ 0.66
PNKP-212ENST00000599454 TGM6O95932 706 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 CT45A8P0DMV1 189 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 CT45A9P0DMV2 189 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 PEPDP12955 493 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 HSD3B1P14060 373 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 FPR1P21462 350 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 GRK2P25098 689 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 HSD3B2P26439 372 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 DPP4P27487 766 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 IL12BP29460 328 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 CD79BP40259 229 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 MC3RP41968 323 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 PNLIPRP2P54317 469 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 ERCC6LQ2NKX8 1250 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 CT45A2Q5DJT8 189 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 LETMD1Q6P1Q0 360 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 PRSS57Q6UWY2 283 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 PLXDC2Q6UX71 529 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 TAOK1Q7L7X3 1001 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 ZNF483Q8TF39 744 aaPredicted RBP19.15■□□□□ 0.66
PNKP-212ENST00000599454 COX4I2Q96KJ9 171 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 MRPL57Q9BQC6 102 aaKnown RBP19.15■□□□□ 0.66
PNKP-212ENST00000599454 C1QTNF3Q9BXJ4 246 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 PFDN4Q9NQP4 134 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 ELOVL5Q9NYP7 299 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 VPS29Q9UBQ0 182 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 MCM8Q9UJA3 840 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 CSPG4Q6UVK1 2322 aa19.15■□□□□ 0.66
PNKP-212ENST00000599454 SLC22A20A6NK97 555 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 ZIC3O60481 467 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 ESRRBO95718 433 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 INHBAP08476 426 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 CRYGSP22914 178 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 SERPINB9P50453 376 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 DSCR4P56555 118 aaPredicted RBP19.14■□□□□ 0.65
PNKP-212ENST00000599454 EEFSECP57772 596 aaKnown RBP19.14■□□□□ 0.65
PNKP-212ENST00000599454 FAM27E3Q08E93 113 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 LARP4Q71RC2 724 aaKnown RBP eCLIP19.14■□□□□ 0.65
PNKP-212ENST00000599454 OR4K17Q8NGC6 315 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 STARD4Q96DR4 205 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 VSTM2LQ96N03 204 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 WFIKKN1Q96NZ8 548 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms