RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 HPCAL1P37235 193 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 MC3RP41968 323 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 ETV4P43268 484 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 SERPINB4P48594 390 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 CDK9P50750 372 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 PNLIPRP2P54317 469 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 UGT3A2Q3SY77 523 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 CYP27C1Q4G0S4 372 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 ATP6AP1LQ52LC2 224 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 CT45A2Q5DJT8 189 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 EMC4Q5J8M3 183 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 CEP85LQ5SZL2 805 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 TIGD3Q6B0B8 471 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 SP5Q6BEB4 398 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 B3GNT6Q6ZMB0 384 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 ZCCHC23Q6ZST2 131 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 NUDCD3Q8IVD9 361 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 OR2L13Q8N349 312 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 OR1J4Q8NGS1 313 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 OR2T11Q8NH01 316 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 TMBIM1Q969X1 311 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 SDCCAG3Q96C92 435 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 ZIM3Q96PE6 472 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 UBQLN3Q9H347 655 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 C3orf14Q9HBI5 128 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 PNPLA3Q9NST1 481 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 OR10H1Q9Y4A9 318 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 PTGDR2Q9Y5Y4 395 aa16.24■□□□□ 0.19
SHKBP1-204ENST00000594862 SNPHO15079 494 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 ZNHIT1O43257 154 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 UGT2B11O75310 529 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 REM1O75628 298 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 TRAPPC6AO75865 159 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 ZWINTO95229 277 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 PSMD4P55036 377 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 PDE7AQ13946 482 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 GALNTL6Q49A17 601 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 RFTN2Q52LD8 501 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 XKR7Q5GH72 579 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 ZNF585AQ6P3V2 769 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 TMEM107Q6UX40 140 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 ANGPTL8Q6UXH0 198 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 PM20D2Q8IYS1 436 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 NATD1Q8N6N6 113 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 SIMC1Q8NDZ2 872 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 OR6Y1Q8NGX8 325 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 MARVELD3Q96A59 401 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 NTNG2Q96CW9 530 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 PGM2Q96G03 612 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 CENPHQ9H3R5 247 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 GLIPR2Q9H4G4 154 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 HHATLQ9HCP6 504 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 Q9N2J8 555 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 ACSS1Q9NUB1 689 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 EXO1Q9UQ84 846 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 ZNF407Q9C0G0 2248 aa16.23■□□□□ 0.19
SHKBP1-204ENST00000594862 C15orf38-AP3S2A0A0A6YYH1 394 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 TMEM233B4DJY2 109 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 TSPAN2O60636 221 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 LYPLA1O75608 230 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 PSMG1O95456 288 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 HSPA4LO95757 839 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 SERPINE1P05121 402 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 COX6B1P14854 86 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 CREB1P16220 341 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 GRK2P25098 689 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 TACR1P25103 407 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 GPC1P35052 558 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 CORO7P57737 925 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 MAD2L1Q13257 205 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 VPS26BQ4G0F5 336 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 C1orf185Q5T7R7 199 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 BICRALQ6AI39 1079 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 LARP4Q71RC2 724 aaKnown RBP eCLIP16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 SLC44A2Q8IWA5 706 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 OR5M9Q8NGP3 310 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 ELP4Q96EB1 424 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 EGLN2Q96KS0 407 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 TSSK3Q96PN8 268 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 SLC6A15Q9H2J7 730 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 SPRR3Q9UBC9 169 aa16.22■□□□□ 0.19
SHKBP1-204ENST00000594862 TEP1Q99973 2627 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 PHF3Q92576 2039 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 ICOSLGO75144 302 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 CBR3O75828 277 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 PRPS2P11908 318 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 BCKDHAP12694 445 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 ENDOUP21128 410 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 PTPN6P29350 595 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 TOMM20Q15388 145 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 DECR1Q16698 335 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 NHSL2Q5HYW2 709 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 FNDC7Q5VTL7 733 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 NPSR1Q6W5P4 371 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 EXOC3L1Q86VI1 746 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 MARVELD2Q8N4S9 558 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 CEP70Q8NHQ1 597 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 AGR3Q8TD06 166 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 NODALQ96S42 347 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 ADOQ96SZ5 270 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms