RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 AP3D1O14617 1153 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 TLX2O43763 284 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 POLR2CP19387 275 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 BCAP31P51572 246 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 TSPAN31Q12999 210 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 C1DQ13901 141 aaKnown RBP17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 ALG11Q2TAA5 492 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 KLHL22Q53GT1 634 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 FCRL6Q6DN72 434 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 USP53Q70EK8 1073 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 HMGN2P46Q86SG4 172 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 VRK2Q86Y07 508 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 PROKR2Q8NFJ6 384 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 TOR1AIP2Q8NFQ8 470 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 ZCCHC10Q8TBK6 192 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 RERGQ96A58 199 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 LYRM4Q9HD34 91 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 DAPP1Q9UN19 280 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 CFL2Q9Y281 166 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 PEX16Q9Y5Y5 336 aa17.96■□□□□ 0.47
PRKCSH-209ENST00000589838 MYO9BQ13459 2157 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 FANCMQ8IYD8 2048 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 SCN3AQ9NY46 2000 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 A0A087WUU8 490 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 C2orf74A8MZ97 194 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 ARHGAP33O14559 1287 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 ZSCAN9O15535 394 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 GPR18Q14330 331 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 SPHARQ15513 63 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 MANEAQ5SRI9 462 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 C6orf132Q5T0Z8 1188 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 ZNF730Q6ZMV8 503 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 PEX5LQ8IYB4 626 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 OR2L13Q8N349 312 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 NANOGP1Q8N7R0 232 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 OR7G2Q8NG99 324 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 OR9Q1Q8NGQ5 310 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 OR10G6Q8NH81 332 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 PIGXQ8TBF5 258 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 RSC1A1Q92681 617 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 COL26A1Q96A83 441 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 ZFYVE21Q9BQ24 234 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 TAPBPLQ9BX59 468 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 TEX12Q9BXU0 123 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 QRSL1Q9H0R6 528 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 POT1Q9NUX5 634 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 PILRAQ9UKJ1 303 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 LSM2Q9Y333 95 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 SLC22A7Q9Y694 548 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 AGAP5A6NIR3 686 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 FAM170BA6NMN3 283 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 CTSVO60911 334 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 PORP16435 677 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 ALOX12P18054 663 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 RABIFP47224 123 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 PSMD7P51665 324 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 ZNF45Q02386 682 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 LARS2Q15031 903 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 SNAPC1Q16533 368 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 ARHGAP11BQ3KRB8 267 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 DEFB134Q4QY38 66 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 SLC27A4Q6P1M0 643 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 Q6ZSR6 202 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 RASSF6Q6ZTQ3 369 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 ATCAYQ86WG3 371 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 IQCF1Q8N6M8 205 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 DIO2Q92813 273 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 OPALINQ96PE5 141 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 SLC38A2Q96QD8 506 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 CENPOQ9BU64 300 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 C6orf62Q9GZU0 229 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 CLDND1Q9NY35 253 aa17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 DIMT1Q9UNQ2 313 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-209ENST00000589838 ISPDA4D126 451 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 OR5K4A6NMS3 321 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 MYL12BO14950 172 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 DSCR3O14972 297 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 PRKYO43930 277 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 KIAA0513O60268 411 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 RAB36O95755 333 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 ADRA2AP08913 450 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 CPMP14384 443 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 RGS8P57771 180 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 RUNX2Q13950 521 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 DECR1Q16698 335 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 EIPR1Q53HC9 387 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 PERM1Q5SV97 790 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 TMEM92Q6UXU6 159 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 CYP4Z2PQ8N1L4 340 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 RPLP0P6Q8NHW5 317 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 CDADC1Q9BWV3 514 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 SIAEQ9HAT2 523 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 CTPS2Q9NRF8 586 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 SEC14L4Q9UDX3 406 aa17.94■□□□□ 0.46
PRKCSH-209ENST00000589838 TCRBV21S2A2A0A5A6 115 aa17.93■□□□□ 0.46
PRKCSH-209ENST00000589838 CPSF4LA6NMK7 179 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-209ENST00000589838 P2RX6O15547 441 aa17.93■□□□□ 0.46
PRKCSH-209ENST00000589838 OR5F1O95221 314 aa17.93■□□□□ 0.46
PRKCSH-209ENST00000589838 ENDOUP21128 410 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-209ENST00000589838 CDH3P22223 829 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms