RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CT45A9P0DMV2 189 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 PCSK2P16519 638 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 CPA2P48052 419 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 GAS1P54826 345 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 TRA2BP62995 288 aaKnown RBP13.1□□□□□ -0.31
SDF2-202ENST00000585428 CT45A2Q5DJT8 189 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 SGO1Q5FBB7 561 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 FAM180BQ6P0A1 224 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 CIARTQ8N365 385 aaPredicted RBP13.1□□□□□ -0.31
SDF2-202ENST00000585428 OR4F6Q8NGB9 312 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 PIGTQ969N2 578 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 TMBIM1Q969X1 311 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 MRRFQ96E11 262 aaKnown RBP13.1□□□□□ -0.31
SDF2-202ENST00000585428 BTBD9Q96Q07 612 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 ZNF395Q9H8N7 513 aaPredicted RBP13.1□□□□□ -0.31
SDF2-202ENST00000585428 BRF2Q9HAW0 419 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 TMCO1Q9UM00 188 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 SLC12A4Q9UP95 1085 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 BCAS2O75934 225 aaPredicted RBP13.09□□□□□ -0.31
SDF2-202ENST00000585428 ARL1P40616 181 aaPredicted RBP13.09□□□□□ -0.31
SDF2-202ENST00000585428 MAGEA12P43365 314 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 SERPINB8P50452 374 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 CLDN15P56746 228 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 B3GALT5-AS1P59052 145 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 MRPS35P82673 323 aaKnown RBP13.09□□□□□ -0.31
SDF2-202ENST00000585428 C2orf54Q08AI8 447 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 LTB4RQ15722 352 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 OR5M10Q6IEU7 315 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 ZNF474Q6S9Z5 364 aaPredicted RBP13.09□□□□□ -0.31
SDF2-202ENST00000585428 PRIMA1Q86XR5 153 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 CCDC116Q8IYX3 515 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 TMEM151AQ8N4L1 468 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 ZNF675Q8TD23 568 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 ZNF592Q92610 1267 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 ERP27Q96DN0 273 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 COX4I2Q96KJ9 171 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 ADOQ96SZ5 270 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 RAB17Q9H0T7 212 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 VPS11Q9H270 941 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 ELOVL6Q9H5J4 265 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 ANKRA2Q9H9E1 313 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 C6orf203Q9P0P8 240 aaPredicted RBP13.09□□□□□ -0.31
SDF2-202ENST00000585428 HEY2Q9UBP5 337 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 ZNF225Q9UK10 706 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 WIF1Q9Y5W5 379 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 ZNF780BQ9Y6R6 833 aa13.09□□□□□ -0.31
SDF2-202ENST00000585428 SMPD2O60906 423 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 CGAP01215 116 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 CTAGE8P0CG41 777 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 KIR2DL2P43627 348 aaPredicted RBP13.08□□□□□ -0.32
SDF2-202ENST00000585428 PNLIPRP2P54317 469 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 ACKR1Q16570 336 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 ZNF628Q5EBL2 1059 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 LETMD1Q6P1Q0 360 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 RPS27LQ71UM5 84 aaKnown RBP13.08□□□□□ -0.32
SDF2-202ENST00000585428 BTLAQ7Z6A9 289 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 GRAMD2AQ8IUY3 354 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 P3H2Q8IVL5 708 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 CTAGE4Q8IX94 777 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 KLHL29Q96CT2 875 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 MARK4Q96L34 752 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 VSTM2LQ96N03 204 aa13.08□□□□□ -0.32
SDF2-202ENST00000585428 NME6O75414 186 aaPredicted RBP13.07□□□□□ -0.32
SDF2-202ENST00000585428 OTCP00480 354 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 SBK3P0C264 359 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 COL6A2P12110 1019 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 CRYGSP22914 178 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 GRK2P25098 689 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 DPP4P27487 766 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 UGT2B10P36537 528 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 CD79BP40259 229 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 CDH13P55290 713 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 DSCR4P56555 118 aaPredicted RBP13.07□□□□□ -0.32
SDF2-202ENST00000585428 CORO7P57737 925 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 EFR3AQ14156 821 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 UAP1Q16222 522 aaPredicted RBP13.07□□□□□ -0.32
SDF2-202ENST00000585428 Q5PR19 223 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 OR2A2Q6IF42 318 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 VWA1Q6PCB0 445 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 C22orf34Q6ZV56 151 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 C1orf52Q8N6N3 182 aaKnown RBP13.07□□□□□ -0.32
SDF2-202ENST00000585428 ZNF483Q8TF39 744 aaPredicted RBP13.07□□□□□ -0.32
SDF2-202ENST00000585428 SELENOMQ8WWX9 145 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 PGM2Q96G03 612 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 SFXN2Q96NB2 322 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 BDH2Q9BUT1 245 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 FAIM2Q9BWQ8 316 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 C1QTNF3Q9BXJ4 246 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 FUT8Q9BYC5 575 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 ACSS3Q9H6R3 686 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 ZDHHC18Q9NUE0 388 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 NMRK1Q9NWW6 199 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 KLHL28Q9NXS3 571 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 ELOVL5Q9NYP7 299 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 ZNF226Q9NYT6 803 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 VPS29Q9UBQ0 182 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 UTS2RQ9UKP6 389 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 SNX6Q9UNH7 406 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 DOCK7Q96N67 2140 aa13.07□□□□□ -0.32
SDF2-202ENST00000585428 MED12Q93074 2177 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms